Streptomyces vinaceus: CP980_04950
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Entry
CP980_04950 CDS
T06865
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
svn
Streptomyces vinaceus
Pathway
svn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
svn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CP980_04950 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svn03400
]
CP980_04950 (uvrA)
DNA repair and recombination proteins [BR:
svn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CP980_04950 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CP980_04950 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
ABC_tran
DnaJ_CXXCXGXG
AAA_29
AAA_16
AAA_21
Anti-TRAP
AAA_25
nSTAND1
AAA_22
DUF4350
AAA_33
DUF5351
NACHT
Viral_helicase1
cobW
Pput2613-deam
Motif
Other DBs
NCBI-ProteinID:
QEV44506
UniProt:
A0A5J6JA01
LinkDB
All DBs
Position
complement(1094229..1096697)
Genome browser
AA seq
822 aa
AA seq
DB search
MSKDATDPFVHVRGASENNLRNIDVDVPRDAMVAFTGISGSGKSSLAFGTLYAEAQRRYF
ESVAPYARRLLQQVGAPHVQEITGLPPAVALQQRRGSPSSRSTVGTLTTLSNLLRMLYSR
AGTYPPGAARLEAESFSPNTTAGACPECHGLGVVHDVAEDLLVPDPSLSIREGAIAAWPG
AWQGANLRSVVNGLGIDIDRPWRRLKKKDRDWLLYTDEQPSVYIEPEEDRVDYGYQGTFW
SARKHVMHVLADSKSEKMRERALRFVRSVPCPECQGSGLRPEALAVTFAGRSIAEINAMP
LTEVVRLLRPVAGRSEADATTSTARSGETTEVAVRICGDLVARVDVLLDLGLGYLGLGRR
STTLSPGEAQRLRIATQLRSGLFGVVYVLDEPSAGLHPADAEPLLDVLERLKAAGNSLFV
VEHDMDVVRRADWVVDIGPGAGEGGGRVLYSGPVAGLERVAESATSQYLFGRAQPLDHRP
RTPQGWLHLSGVSRHNLHDVSVDVPLCVLTAVTGVSGSGKSTLVTQVLAEVVGGHLGLVP
EEPDEAQLVVDVQDASGVESFDRLVRVDQRPIGRTPRSNLATYTGMFDAVRKLYAATDEA
RARGYSAGRFSFNVPEGRCETCQGEGFVAVELLFLPGTYAPCPTCHGARYNAETLEVTYR
GKNIAEVLGLSVDAAAAFLSALPAASRSLETLREVGLGYLRLGQPATELSGGEAQRIKLA
TELQRARRGHALYLLDEPTAGLHPSDVALLLRQLHRLVDAGNTVVLVEHDLDTIATADWV
IDLGPGGGDAGGRVVAAGPPAKVARARRSATAPYLAARLARS
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaggacgcgaccgacccgttcgtgcatgtccggggcgccagtgagaacaacctg
cggaacatcgacgtcgacgtgccgcgggacgcgatggtcgccttcaccggcatctccggt
tcgggcaagtcctcgctcgcgttcggcacgctctacgcggaggcccagcggcgctatttc
gagtccgtggcaccgtacgcccgaagactgttgcagcaggtcggtgcaccgcacgtgcag
gaaatcaccggactgccaccggccgtggccctgcagcagcggcgcgggtcgcccagctcg
cgctcgacggtcggcaccctcaccacgctgtccaatctgctgcgcatgctgtactcccgg
gccggcacctatccccccggggcggcacggctggaagccgagtcgttctcacccaacacc
acggccggtgcctgccccgaatgccacgggctgggcgtcgtgcacgacgtcgccgaggac
ctgctcgtcccggatccctcgctgagcatccgcgagggggcgatcgccgcctggccgggc
gcctggcagggcgccaatctgcgcagtgtcgtgaacggcctggggatcgacatcgaccgg
ccgtggcgcaggctcaagaagaaggaccgggactggctgctgtacaccgacgagcagccc
tccgtgtacatcgagccggaggaagaccgcgtcgactacggctaccagggcacgttctgg
agcgcccgcaagcacgtcatgcacgtcctcgccgactccaagagcgagaagatgcgcgaa
cgggcgctccggttcgtcaggagcgtgccctgccccgagtgtcagggcagcggactgcgg
cccgaggcgctcgccgtgaccttcgccggacgttccatcgccgagatcaacgcgatgccg
ctcaccgaggtcgtgaggctgctgcggcccgtcgcggggcggtccgaggccgacgccacc
acgtcgaccgcccgatccggggagacgaccgaggtcgctgtccgcatctgcggcgatctg
gtcgcgcgggtcgacgtactgctcgacctgggcctcgggtatctcggcctcggtcgccgc
tcgacgaccctgtcgcccggcgaggcccagcgcctgcggatcgccacccagctgcgctcg
gggctgttcggcgtcgtctacgtcctcgacgaaccctccgcgggcctgcacccggctgac
gcggaaccgctgctggacgtgctggagcgcctgaaggcggcgggcaactcgctgttcgtc
gtggagcacgacatggacgtcgtacggcgggcggactgggtggtcgacatcggccccggc
gcgggcgagggcggcggacgggtgctgtacagcggcccggtcgccggtctggagcgggtg
gcggagtcggccacgagccagtacctgttcgggcgcgcccagccgctcgatcaccgcccg
cgcacaccgcaaggctggctgcacctgagcggcgtctcccgccacaacctgcacgacgtg
tccgtcgacgtaccgctgtgcgtgctgacggcggtgacgggcgtgtccggttccgggaag
tcgacactggtgacgcaggtgctcgccgaggtcgtcggcggccacctcggactcgtaccc
gaggagcccgacgaggcgcagctggtcgtcgacgtccaggacgcgtcgggggtcgagtcg
ttcgaccggctggtccgggtcgaccaacggcccatcggccgaaccccccgttccaacctg
gcgacgtacacggggatgttcgacgcggtgcgcaagttgtacgcggcgacggacgaggcc
agggcgcgcggctactcggccggacggttctccttcaacgtgcccgaaggccggtgcgag
acctgccagggcgagggattcgtcgcggtggaactgctcttcctgcccggcacctacgca
ccctgcccgacctgccacggtgcccggtacaacgccgaaacgctggaagtcacctaccgc
ggcaagaacatcgcggaagtgctggggttgtccgtcgacgccgccgccgcgttcctgtcc
gccctcccggccgcctcccgcagtctggagacgttgcgcgaggtgggactggggtacctg
cggctggggcagcccgcgacggagctcagcggtggtgaggcgcaacgcatcaaactggcc
accgaactgcagcgggcccgccgcggccacgcgctctacctgctcgacgaaccgacggcg
gggctgcacccctcggacgtcgcgctgctgctgcgacagctgcaccggctcgtcgacgcc
ggcaacacggtcgtcctcgtcgagcacgacctggacacgatcgccaccgccgactgggtc
atcgacctggggccgggcggcggcgacgcgggcgggcgggtggtcgcggcgggcccgccg
gccaaggtggcgagagcccgccgcagcgccaccgcgccctacctcgcggcccggctcgcg
cgctcctga
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