Shewanella violacea: SVI_3021
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Entry
SVI_3021 CDS
T01206
Name
(GenBank) glutamate decarboxylase, putative
KO
K24264
aspartate 1-decarboxylase [EC:
4.1.1.11
]
Organism
svo
Shewanella violacea
Pathway
svo00770
Pantothenate and CoA biosynthesis
svo01100
Metabolic pathways
svo01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00770 Pantothenate and CoA biosynthesis
SVI_3021
Enzymes [BR:
svo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.11 aspartate 1-decarboxylase
SVI_3021
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GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
SepSecS
P53_tetramer
Motif
Other DBs
NCBI-ProteinID:
BAJ02992
UniProt:
D4ZAE7
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Position
3428679..3430331
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AA seq
550 aa
AA seq
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MSMTPRRATASEEALLRIFTVPEAPDSTLSVIEKNISQNLMGFLQESVVAVEKPLSEIEL
DFQQHQIPSAPQFVSDYADEMMKTLVAHSVHTSSPSFIGHMTSALPYFVLPLSKMMVGLN
QNLVKIETSKAFTPLERQVLGMMHHLIYSEDDKFYKNWMHSANYSLGAFCSGGTIANITA
LWTARNQLLKADGDFKGVSAQGLMKGLRHYGYDDLAILVSERGHYSLAKTADLLGIGRDN
IIQVPTSSDNKVDVDKMRAMAKQLDLDNIKVMAIVGVAGTTETGNIDPLDELATLAVELN
CHFHVDAAWGGASLLSNKYRHLLKGIERADSVTIDAHKQMYVPMGAGMVIFKDPAFANAI
KHHAEYILRKGSKDLGSQTLEGSRPGMAMLVHACLQIIGRDGYEILINNSLEKARYFAEL
IHGQDDFQLVSEPELCLLTYRYVPKSVQEAMQETRESGNTEKLIEFNSLLDGLTKFVQKR
QREQGTSFVSRTRINPESRASLNIQSVVFRVVLANPLTTREILQQVLAEQIEIAQQDNEF
LPQLLALASN
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgacacccagacgagccacagcttcggaagaggcattattgcgcatcttcaca
gtaccagaagcccctgattctacattaagcgtcatcgagaaaaacatatcgcaaaactta
atgggcttcttgcaagagagtgtggttgccgtcgaaaagcctttatctgagatagagcta
gatttccaacagcatcaaatcccctctgcgcctcagtttgtctcagactatgccgatgag
atgatgaagaccttagtggcgcactcggtgcatacgtcatcccctagctttattggtcat
atgacctcggctctgccttacttcgtcttacctctgtctaagatgatggtcgggcttaac
cagaatctggtaaaaattgagacctctaaagccttcacgccactggaacgtcaagtctta
ggcatgatgcatcacctgatctacagtgaagatgataagttttacaaaaactggatgcac
agcgccaactactccctcggagcattttgctcaggcggcactatcgctaacatcacagcc
ctatggactgcacgtaatcagctgctcaaggctgacggagatttcaagggcgtttcggct
caaggcctgatgaagggactgcgtcactatggctatgatgatttagccatcttagtctcc
gagcgtggtcactactcattggcgaaaacggcagacctgcttggcataggccgagataac
atcattcaggtgcccacatccagtgacaacaaggtcgatgttgataagatgcgcgccatg
gcgaaacagcttgatctggacaatatcaaggtaatggccatagtcggtgttgctggcacc
acagaaacaggcaatatcgaccccttagacgaacttgccacactggctgtagagcttaat
tgccatttccacgtcgatgcggcttggggcggcgcctcattattatccaacaagtaccgc
cacctgcttaaaggcatagaacgcgccgactctgtgacaatcgatgctcacaaacagatg
tatgtgcccatgggtgcgggtatggtgattttcaaagacccagcctttgccaacgccatc
aaacaccacgccgaatacatattacgcaagggttctaaagacctgggaagtcaaactctg
gagggatcgcgtcctgggatggccatgctggtccatgcttgcctgcagatcattggccga
gatggttacgagattttaatcaataacagtctggagaaggcacgttatttcgccgaacta
atccatggccaagatgacttccagctggtatctgagcccgaactctgtctgctcacctat
cgctatgtgcctaaatcggtacaagaggcgatgcaagagacaagagagagtggtaacact
gagaagttaattgaatttaatagcttactcgacggcctgactaagtttgtccagaaacgt
caacgagaacaaggcacctcatttgtttcccgtactcgtattaaccctgagagccgcgca
agtctgaatatccaatctgtggtgtttcgagtagtactggctaatcccctcaccacccgt
gagatattgcagcaggtcttagccgagcagatagagatagcccaacaagataacgagttc
ttaccgcaactcttggctctcgcctctaactaa
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