Shewanella violacea: SVI_3642
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Entry
SVI_3642 CDS
T01206
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
svo
Shewanella violacea
Pathway
svo00250
Alanine, aspartate and glutamate metabolism
svo00310
Lysine degradation
svo00350
Tyrosine metabolism
svo00650
Butanoate metabolism
svo00760
Nicotinate and nicotinamide metabolism
svo01100
Metabolic pathways
svo01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SVI_3642 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SVI_3642 (gabD)
00310 Lysine degradation
SVI_3642 (gabD)
00350 Tyrosine metabolism
SVI_3642 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
SVI_3642 (gabD)
Enzymes [BR:
svo01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
SVI_3642 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
SVI_3642 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
SVI_3642 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
BAJ03613
UniProt:
D4ZC68
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All DBs
Position
complement(4122523..4123980)
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AA seq
485 aa
AA seq
DB search
MQQVNDSGLVKLSSYIDGRWSDSSERFDVINPANDRVVAQVCNAGIAETEAAVVAAKKAL
PAWSKKSANERAVILRSWFNLMMESQDDLSRILTLEQGKPLAEAKGEIAYGAAFIDWFAE
EGKRVYGDIIPSPTGDKRIIVIKQPVGVVAAITPWNFPNAMIARKAAAALAAGCTFVVRP
SPSTPLSALAMAELAERAGVPAGVFNVVVGLDSSGMGKVLTQHPDVSKFSFTGSTAVGKI
LMNQTATSVKKVSMELGGNAPFIVFDDADIYEAVQGALISKYRNAGQTCVCTNRVLVQRS
VVQEFTDKFASAVAEIKIGNGLAAGVNLGPMITSEAVDGVHKLVEETVAAGAKIIAGGKR
SAAGNNFYEPTILTGVTNDMPLASNEIFGPVTPIISFDTEEEAIKIANDTEYGLAAYFYS
RDIGRVWRVAEGLEFGMVGINEGIIANPAAPFGGIKQSGNGREGSKYGLDDYMEIKYICM
GGLNS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagttaacgattcaggattagtgaagttaagctcttatatagatggacgctgg
agtgacagctcggagcggttcgatgtcattaatcctgctaatgacagggtagtggctcag
gtatgcaacgcaggtatagccgagactgaagcggctgttgttgccgctaagaaagcctta
cctgcttggtctaaaaaatcggccaacgagcgtgcggtcattttgcgtagctggtttaac
ttgatgatggagagtcaggatgatctaagtcgcatcttgaccttagagcaaggtaagccc
ttagccgaagctaaaggggagatagcttacggtgcggcctttatcgattggtttgccgaa
gagggcaaacgagtttatggtgatattattccttcgcctacaggtgataagcggattatc
gttattaagcagcctgtaggagttgtcgctgctatcacgccgtggaactttcctaatgcc
atgatcgcccgcaaagcggctgctgctctggctgcaggttgtaccttcgtggtgcggcct
tcaccctctacgcctttgtctgcactggctatggccgaacttgccgagcgtgcaggcgtg
ccagccggtgtgttcaacgtggttgtcggcttagattcatctggtatgggcaaggtgctg
actcagcatccggatgtgtctaaattcagcttcaccggctcaacagcggttggcaaaata
ttgatgaatcaaacggccacaagcgtaaagaaggtgtcgatggagctcggcggtaacgcc
ccctttatcgtattcgatgacgccgatatctatgaggcagtccaaggcgcactcatctct
aaatatcgtaatgcaggccagacctgtgtctgtactaaccgtgttttagttcagcgtagt
gtggttcaggagttcaccgataaatttgccagtgcggtggctgagattaagattggcaat
ggcttagccgctggtgtcaacttaggcccaatgatcacatcagaagcggtcgatggcgtg
cataagttagtggaagaaactgtcgctgcaggggcaaaaattattgccggaggcaagcgc
agcgctgcgggtaacaacttctatgagccgacaattctgactggggtcactaatgatatg
cccttggctagcaatgagatttttggcccagtaacgcctatcatcagcttcgataccgaa
gaggaagccattaaaattgccaacgatacagaatatggcttagcagcctacttctattcc
cgggatattggtcgagtgtggcgtgtggctgaaggattggagttcggcatggtgggtatc
aacgaaggcatcattgctaatccggcggcgccatttggtggtatcaagcaatcgggtaat
ggccgtgaaggttctaagtatggactcgatgactatatggaaatcaaatatatctgcatg
ggtggtctaaatagctaa
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