Shewanella violacea: SVI_3821
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Entry
SVI_3821 CDS
T01206
Name
(GenBank) hypothetical protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svo02000
]
SVI_3821
Transporters [BR:
svo02000
]
Other transporters
Pores ion channels [TC:
1
]
SVI_3821
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
TSP_3
Pilus_CpaD
Motif
Other DBs
NCBI-ProteinID:
BAJ03792
UniProt:
D4ZCP7
LinkDB
All DBs
Position
4343891..4344508
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AA seq
205 aa
AA seq
DB search
MNNTISSVLITLTLGLMSGCAQTATPYPAQAQTRDLLDTDNDGVINARDNCRQTTSGAMI
NNDGCSKSLNQIQERTKVVMFDFDSSHLTNSEVGKVSELLGDLMNLPEARLLLIGDTSPE
GSDSYNRALAQRRVDTIQELAKEVGFPTQSIISQTYDQSDRTPTSISGREHRLIAVGQWQ
ESGSQMMWNIFTTESKAKSQKPNNI
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatacaatatcaagtgtacttatcacactgactctgggcttaatgtcgggctgc
gctcaaacagcgacaccttatccggctcaggcacagactagagatctactggatactgat
aacgatggtgtgatcaatgccagagataattgtagacaaaccacaagcggtgccatgata
aataatgatggctgctctaagagcctgaatcagattcaggaaagaaccaaggtggtcatg
tttgatttcgacagctcacatctaaccaatagcgaagtaggtaaggtctctgagctgtta
ggcgacctgatgaacttgcctgaggctagattgctgctcataggcgatactagccctgaa
ggtagcgacagttataatcgtgcattggctcaacgtcgtgtcgataccatacaggaactt
gccaaagaggttggctttccaactcagagtatcatcagccagacctatgatcagagcgac
cgaacacctacctctatctcaggaagggaacacagactgattgccgtgggccaatggcaa
gaatctggtagccagatgatgtggaatatcttcaccacagagtccaaagccaaaagccaa
aagccaaataatatttga
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