Setaria viridis (green foxtail): 117838984
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Entry
117838984 CDS
T07951
Name
(RefSeq) serine/arginine-rich splicing factor SR34A-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117838984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117838984
Spliceosome [BR:
svs03041
]
Common components
Common spliceosomal components
SR proteins
117838984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
117838984
NCBI-ProteinID:
XP_034575095
LinkDB
All DBs
Position
9:complement(44351413..44355822)
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AA seq
285 aa
AA seq
DB search
MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAED
AIAGRDGYNFDGHRLRVEPAHGGRGNASSHDRGSGGFGGGARRGVSRHSEYRVLVTGLPS
SASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDTEFRNAFGRA
YIRVKEYDGKRGRSDSRSRSPSRSYSRSRSPSKSPRARRSASRSRSRSVSSRSRSPSKGR
SPSRSPARSKSPNASPANGEAAASPKKQSPSRSPSGSRSPDAKPE
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggcgctggagccgcacgatctacgtcgggaaccttcccggcgacatccgggag
agggaggtggaggatctcttctacaagtatgggagaattgttgacattgacttgaaggtc
cccccgaggccacctggttatgcttttgttgagtttgaagatcctcgtgatgctgaggat
gcaattgctgggcgggatggatacaattttgatggacaccgcctaagagtggaacctgct
catggtggtagaggtaatgcttcctcacatgatcgtggttcaggtggctttggtggtggg
gcacgccgtggtgtgtcaaggcactcggagtatcgtgttcttgtcactggactgccttct
tctgcatcatggcaggatctgaaggatcatatgcggaaggctggagatgtttgtttctct
gaagtttaccgtgaaggcggtggcaccgtaggaattgtggactacacaaactatgatgac
atgaaatatgcgataaagaagctggatgatactgaattcaggaacgcctttgggcgagct
tatataagggtgaaggaatatgatggcaaacgtggtcgctctgactcacgtagccgaagc
ccaagtcgtagctacagcagaagcaggagcccgagcaaatcacccagggctcgccgctca
gcatctagatcccggtctaggtctgtttcttcccgttcaaggtctccatcaaaaggccgt
tctccgtcaagatcaccagcaagatccaaatctcctaatgcttctccggcgaatggtgaa
gcagcagcaagccccaagaagcagagcccaagcagaagcccatcaggctcccgctcccct
gatgcgaagcctgagtag
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