Setaria viridis (green foxtail): 117857416
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Entry
117857416 CDS
T07951
Name
(RefSeq) putative leucine-rich repeat-containing protein DDB_G0290503
Organism
svs
Setaria viridis (green foxtail)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
KIP1
Crescentin
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
117857416
NCBI-ProteinID:
XP_034595957
LinkDB
All DBs
Position
5:complement(30650773..30664760)
Genome browser
AA seq
2607 aa
AA seq
DB search
MTKKHKIRKSKYLLESKKDVDENVENILRMIGEETEQTENEKDDYGNPVKKLKLSSLVRG
FHEDYQYLHKHYKQLISKLENVGYNFSGSDSSDSDTEGDSSDNDVTAPKVAVKEENNLYH
KPTEHHNMEAEIEKLKQSTEEQAKEISDLKQLIDKAIKDKEATSSEIANLSSENENMKLL
VETAKREEGKLLNTVKSKETEVTTLSCEKKIIEEERDNLKMLIVDMEKEKEDLRNKLNET
MDKCNLLSVEVEKAQQAEKEVQTLLEENQKLKNDNLMLLVEHDNLKALHQNLDVECFQLK
AAIAEITAKNESLITENHSAERKLQQLGLEIEGLKVEAAELMNNLDKERRTAAEEKERLV
SENSMYLNELEKAQSSVKALENELKSTINVMNSNIAELQKDNDSATSEIEQLEASLMNLK
TELAQQLERISDMQKTNEGLELANSNLHNEIVELQGQKNEAAASVINLESKLEQQVQKIS
NLLEANKDLEAAKTDMYNEVTALQEEKNAALAQLQQSEANIKKLQSDLVQQQNQISLFQQ
ENEELQNTNSSLHKQLEEIRTTLQDEIIVLQGEKEEAINSLHQSNDSVKTLGAQLEQAVE
QISVLQLANEDLQNSNSQLKMQLEEAKFSHQAEILALQDEKNKIISDLQQSEASIKNLVS
NIAELQKDNDSATSEIEQLEASLMNLKTELAQQLERISDMQKTNEVLELANSNLHNEIVE
LQGQKNEAAASVINLESKLEQQVQEISKLQEANKDLEAGKTDLYNEVMALQAEKNASLAQ
LQQSEANIKELQSDLVQQQNQISHFQRENEELQSTNSNLHKQLEEIRTNLQDEIIVLQGV
KEEAINSLHQSNDSVKTLGVLLDQRVDQISDLKLANEDLQNSNSKLKMQLEEAKFSHQAE
ILALQDEKNKIISDLQQSEASIKNLVSNISELQKDNDCATSKIEQLEASLMNLKTELAKQ
IESILDMQKTNEGLELANSNLHNEMVELQGQKNEAAASVINLESKLEQQVQEISKLQEAN
KDLEEGKSDLYNEVMALQAEKNAALAQLQQSEANIKELQSDMVQQQNQILLFQRENEELQ
STNSRLHKHLEEIRTNLQDEIIVLQGEKEEAINNLHQSNDSVKTLGAQLEQAVEQISVLQ
LANEDLQNSNSQLKMQQEQAKFSHQAEILAQQDEKNKIISDLQQSEASIKNLVSNIAELQ
KDNDSATSEIEQLEASLMNLKTELAQQLERISDMQKTNEGLELANSNLHNEIVELQGQKN
EAAASVINLESKLEQQVQEISNLQKANKDLEAAKTDLYNEITTLQEEKNAALAQLQQSEA
NIKKLQSDLVQQQNQISHFQRENEELQSTNSSLHKQLEEIRTTLQDEIIVLQGVKEEAIN
SLQKSNDSLKTLGVLLDQRVEQISDLQLANEDLQKSNSKLKMQLEEAKFSHQAEILALQD
EKNKIISDLQQSEASIKNLVSNIAELQKDNDSATSEIEQLEASLMNLKTELAQQLERISD
MQKTNEGLELANSNLHNEIVELQGQKNEFAASVINLESKLEQQVQEISYLQKANKDLKAA
KTDLYNEVTILQEEKNTALTQLQQSEANIKKLQSDLVQQQNKISHFQRENEELQNTNSSL
HKELEEIRTTLQDEIIVLQGVKEEAINSLHQSNDSVKTLGVQLEQQVEQIYVLQLANEDL
QNINSRLKMQLEEAKSHQAEILALQDEKNKIISDLQQSEASIKILVSNIAELQKDNDSAM
SEIEQLEASLMNLKTELAKQLERISDMQKTNEGLELANSNLHNEIVELQGQKNEAATSVI
NLESKLEQQVQEISKLQEANKDLEAGKTDLYNEVMALQAEKNAALAQLQQSEANIKELQS
DMVQQQNQILLFQRENEELQSTNSRLHKQLEEIRTNLQDEIIVLQGEKEEAINSLHQSND
SVKTLGAQLEQAVEQISVLQLANEDLQNSNSRLKMQLEEAKCSHQAEILALQDEKNKIIS
DLQQSEASIKNLRIELKQGKEQISKMNLSNEDLTNNIAILNKQLEEVRSSLHAEIAQLQA
EKGIVLSELQVSQASVRNLESVLEKQSEKISTLDQANDQLQKNICTLTEQSEQTKAELQK
EVEATQEEKDTALTQLKQSQTSVQNLENEVTRLKEDLSVQLESNSTLDKQLEEVRSSTHA
EIAELRAEKDATLLELQTSQASARNLEIALQTQNENISTLQQANDESQKIICTLTEQSEQ
AKAELQQEVKATQEEKDAVLTKLKQSEDSVQNLANEVTQLKDELSVQLENNSTLEKQLEE
AILKVSNLHENLEKAQAEAACQIDDMSTKTKDLEKTIDLLSCRKTKLEEDLKIMIKACIV
NMSFMTEFEDRVTQKISDYEAGLVALHQSLKGVTSSCQRLQYAYDEVSSRVSQLEILKRS
QIEEIGQLEVKHTETLEKHRLLEEENLSANKVNTKLQKHVQDLEVQLQLAKQKLKVTEAE
SKCKEDSYAMAVETSQAEIHRLEQLVKQFSGRVSLLEETLMQVKGHAVSGVKVLRKKLHD
QLDEQKELVKENDEMSVRLREKEKLVSEMVKNSVEAEAKIVQLEKMVAEKEEELAARVHK
KKPRLSTLFFRFRKKSAGEERSHQAAE
NT seq
7824 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaaacacaaaattaggaaatccaagtatcttcttgagagcaaaaaggatgtt
gatgagaatgtggagaacattttgcgaatgataggagaggagaccgagcagactgagaat
gaaaaagatgattatggaaatcctgtcaagaaattaaagctgtcttcccttgtgaggggc
ttccatgaggactatcaataccttcacaagcactacaagcaactaattagcaaactagaa
aatgttggctacaatttctctggttcagattcatctgattcagacacagaaggagacagc
tcagacaatgatgtcactgcaccaaaagtagcagtgaaggaagaaaacaacctataccat
aagcctactgagcatcataacatggaagcagagattgagaagctgaaacaaagtacagaa
gaacaggccaaggaaatatctgatctgaagcagctaattgataaagcaatcaaagataaa
gaagctacaagttcagagattgcaaatttgtcatctgagaatgaaaatatgaaattgtta
gttgaaactgcaaaaagggaggaaggaaaattgcttaacaccgtaaaatccaaggagact
gaggtcacaacattgtcttgtgagaagaagattattgaagaagagagagataacctgaag
atgttaattgtagacatggagaaggagaaggaagatctgaggaataagctgaatgaaaca
atggacaaatgcaacctcctatcagtagaagttgagaaggcccaacaggctgagaaagaa
gtgcagaccttgttggaagaaaaccagaagctgaagaatgataacttgatgctattggtt
gagcatgataacctgaaagcacttcatcagaatttagatgttgagtgctttcaactgaag
gcagccattgcagaaatcaccgctaaaaatgaatccttgatcacagaaaatcattcagct
gaaagaaaactccagcaactggggttagagatagaggggcttaaagtggaggccgcagag
ctaatgaacaatctggacaaggagcgtcgtactgcagcagaagaaaaagaaagactagta
tcagaaaattcaatgtacttgaatgagttagagaaggcacagtctagtgttaaagctcta
gaaaacgaactgaaatcaacaataaatgttatgaatagtaatattgccgagctacagaaa
gataatgattctgccacatcagagatagagcagctagaggcttctttgatgaatcttaag
actgagctagcacaacaacttgagcggatttcagatatgcagaagactaatgaaggcctg
gagctggcaaattctaacctgcataatgaaattgttgaattacaaggacaaaaaaatgaa
gctgctgcttcagttattaatcttgagagcaagttagaacaacaagtccaaaagatttca
aatcttctggaggccaacaaagacctcgaagcagcaaagactgatatgtataatgaggtt
acggcactgcaagaggagaaaaatgcagcactcgctcagttacagcaatcagaggctaac
atcaagaaacttcaaagtgacctggtacagcagcaaaatcaaatttcacttttccagcaa
gaaaatgaagagctgcagaatacaaattctagtttacacaagcaacttgaagagataagg
actactctgcaagatgagatcattgtgctacaaggagagaaggaagaggccattaacagc
ttacatcagtcaaatgattcagtcaagaccttaggagctcagttagagcaggcagttgaa
caaatttctgttctgcagcttgctaatgaagacctacaaaatagtaactcacagttgaag
atgcaactagaagaggcgaagtttagtcaccaagctgaaatattagcactacaagatgaa
aagaacaaaataatttcagatttgcagcagtctgaggcttctatcaagaatcttgtaagt
aatattgccgagctacaaaaggacaatgattctgcgacatcagagatagagcagctagag
gcttctttgatgaatcttaagactgagctagcacaacaacttgagaggatttcagatatg
cagaagactaatgaagtcctggagctggcaaattctaacctgcataatgaaattgttgaa
ttacaaggacaaaaaaatgaagctgctgcttctgttattaatcttgagagcaagttagaa
caacaagtccaagagatttcaaaacttcaggaggccaacaaagacctcgaagcaggaaag
actgatctgtataatgaggttatggcactgcaagcggagaaaaatgcatcactcgctcag
ttacagcaatcagaggctaacatcaaggaacttcaaagtgacctggtacagcagcagaac
caaatttcacatttccagcgagaaaatgaagagttgcagagtacaaattctaatttacac
aagcaacttgaagagataagaactaatctgcaagatgagatcattgtgctacaaggagtg
aaggaagaggccattaacagcttacatcagtcaaatgattcagtcaagacccttggagtt
ctgttagaccagcgagttgatcaaatttctgacctaaagcttgctaatgaagacctacaa
aatagtaactccaagttgaagatgcaactggaagaggcgaagtttagtcaccaagctgaa
atattagcactacaagatgaaaagaacaaaataatttcagatctgcagcagtctgaggct
tctatcaagaatcttgtaagtaatatttccgagctacagaaagataatgattgtgccacc
tcaaagatagagcagctagaggcttctttgatgaatcttaaaactgagctagcaaaacag
attgagagcattttagatatgcagaagactaatgaaggtctggagcttgcaaattctaac
ctacataatgaaatggtagaattacaaggacaaaaaaatgaagctgctgcttcagttatt
aatcttgagagcaagttagaacaacaagtccaagagatttcaaaacttcaggaggccaac
aaagacctcgaagaaggaaagagtgatctgtataatgaggttatggcactgcaagcggag
aaaaatgcagcactcgctcagttacagcaatcagaggctaacatcaaggaacttcaaagt
gacatggtacagcagcaaaaccaaattttacttttccagcgagaaaatgaagagctgcag
agtacaaattctaggttacacaagcaccttgaagagataaggactaatctgcaagatgag
atcattgtgctacaaggagagaaggaagaggccattaacaacttacatcagtcaaatgat
tcagtgaagaccttaggagctcagttagagcaggcagttgaacaaatttctgttttgcag
cttgctaatgaagacctacaaaatagtaactcacagttgaagatgcaacaagaacaggcg
aagtttagtcaccaagctgaaatattagcacaacaagatgaaaagaacaaaataatttca
gatctgcagcagtctgaggcttctatcaagaatcttgtaagtaatattgccgagctacag
aaggataatgattctgccacgtcagagatagagcagctagaggcttctttgatgaatctt
aagactgagctagcacaacaacttgagcggatttcagatatgcagaagactaatgaaggc
ctggagctggcaaattctaacctgcataatgaaattgttgaattacaaggacaaaaaaat
gaagctgctgcttcagttattaatcttgagagcaagttagaacaacaagtccaagagatt
tcaaatcttcagaaagccaacaaagacctcgaagcagctaagactgacctgtataatgag
attacgacactgcaagaggagaaaaatgcagcactcgcccagttacagcaatcagaggct
aacatcaagaaacttcaaagtgacctggtacagcagcagaatcaaatttcacatttccag
cgagaaaatgaagagctgcagagtacaaattctagtttacacaagcaacttgaagagata
aggactactctgcaagatgagatcattgtgctacaaggagtgaaggaagaggccattaat
agcttacagaagtcaaatgattcactcaagacccttggagttctgttagaccagcgagtt
gaacaaatttctgacctgcagcttgctaatgaagacctacaaaaaagtaactccaagttg
aagatgcaactggaagaggcgaagtttagtcaccaagctgaaatattagcactacaagat
gaaaagaacaaaataatttcagatctgcagcagtctgaggcttctatcaagaatcttgta
agtaatattgccgagctacagaaggacaatgattctgcgacgtcagagatagagcagctg
gaggcttctttgatgaatcttaagactgagctagcacaacaacttgagaggatttcagat
atgcagaagactaatgaaggcctggagctagcaaattctaacctgcataatgaaattgta
gaattacaaggacaaaaaaatgaatttgctgcttctgttattaatcttgagagcaagtta
gaacaacaagtccaagagatttcatatcttcagaaagccaacaaagacctcaaagcagcc
aagactgatctgtataatgaggttacaatactgcaagaggagaaaaatacagcactcact
cagttacagcaatcagaggctaacatcaagaaacttcaaagtgacctggtacagcagcaa
aacaaaatttcacatttccaacgagaaaatgaagaactgcagaatacaaattctagttta
cacaaggaacttgaagagataaggactactctgcaagatgagatcattgtgctacaagga
gtgaaggaagaggccattaacagcttacatcagtcaaatgattcagtcaagaccttagga
gttcagttagagcagcaagttgaacaaatttatgttctacaacttgctaatgaagaccta
caaaatattaactcacggttgaagatgcaactagaagaggcgaagagtcaccaagctgaa
atattagcactacaagatgaaaagaacaaaataatttcagatctgcagcagtctgaggct
tctatcaagattcttgtaagtaatattgccgagctacagaaggataatgattctgccatg
tcagagatagagcagctagaggcttctttgatgaatcttaagactgagctagcaaaacaa
cttgagaggatttcagatatgcagaagactaatgaaggcctggagcttgcaaattctaac
ctgcataatgaaattgttgaattacaaggacaaaaaaatgaagctgctacttcagttatt
aatcttgagagcaagttagaacaacaagtccaagagatttcaaaacttcaggaggccaac
aaagacctcgaagcaggaaagactgatctgtataatgaggttatggcactgcaagcagag
aaaaatgcagcactcgctcagttacagcaatcagaggctaacatcaaggaacttcaaagt
gacatggtacagcagcaaaaccaaattttacttttccagcgagaaaatgaagagctgcag
agtacaaattctaggttacacaagcaacttgaagagataaggactaatctgcaagatgag
atcattgtgctacaaggagagaaggaagaggccattaacagcttacatcagtcaaatgat
tcagtgaagaccttaggagctcagttagagcaggcagttgaacaaatttctgttctgcag
cttgctaatgaagacctacaaaatagtaactcacggttgaagatgcaactggaagaggcg
aagtgtagtcaccaagctgaaatattagcactacaagatgaaaagaacaaaataatttca
gatctgcagcagtctgaggcttctatcaagaatcttagaattgaattgaagcaaggaaaa
gagcaaatctcaaaaatgaatctatctaatgaagatctgacgaacaacattgctatattg
aacaagcaattggaggaggtcaggagcagtttgcatgctgaaattgcacaactacaagca
gagaagggcatagttctatcagagttacaggtgtctcaggcttctgtcagaaacttggag
agtgtgctagaaaagcagagtgagaagatttcaactctggatcaagctaatgatcagtta
cagaagaacatatgtaccttgactgagcaatcagaacaaaccaaggctgagctgcagaag
gaggttgaggcaacacaagaagagaaggatacagcactaacacaactaaagcagtcacag
acttcagtacaaaatcttgagaatgaggtgacacgactgaaagaggatctttcagttcag
ctagaaagcaattccaccttggacaagcagttggaagaagtcaggagcagtacgcatgct
gaaattgcagaactacgtgcagagaaggacgcaacgctattggagttacagacgtctcag
gcttctgccagaaatcttgagattgcccttcaaacccaaaatgagaacatttcaactcta
cagcaagctaatgatgagtcacaaaagatcatttgtactttgaccgagcaatcagaacaa
gccaaggctgagctgcagcaggaggttaaggctacacaagaagagaaggatgcagtgcta
acaaagctgaagcaatcagaggattcagtacaaaatcttgcgaatgaggtgacacagctg
aaagatgaactttcagttcagctggaaaacaattctaccttggaaaagcagttggaagag
gcaatactaaaagtatctaacctacatgagaatctcgagaaggctcaggctgaagcagct
tgtcaaattgatgacatgagtacaaaaacaaaagatctggagaagacaatcgatctattg
tcttgtcgaaagaccaagttggaggaggatctaaaaattatgattaaagcatgcatagta
aacatgtcatttatgacagaatttgaagatagagttacacaaaaaatttcggattatgag
gctggacttgtggctctccaccagagcctgaaaggggttactagcagctgtcagaggctt
cagtatgcatatgatgaggtgtcctcgagggtgtcccagctcgagatacttaagaggagt
cagattgaggagataggtcagctagaggtgaaacacacagaaactttggagaaacatcga
cttctggaagaggaaaatttgtctgcaaataaggtgaacacaaagctacaaaagcatgtc
caagaccttgaagttcaactccagctagccaagcagaagcttaaagttaccgaggcagaa
agcaaatgcaaagaagatagctacgcaatggcagtggagacatcacaggcagagatccat
cgccttgaacaactagtaaagcagttttctggaagagtcagcttgctggaagaaactctc
atgcaagtaaaaggacatgccgtatcaggggtcaaggtcctgaggaagaagctacatgat
cagcttgatgaacagaaggaacttgtcaaggagaatgatgagatgtctgttaggttgaga
gagaaagaaaagttggtgtcagaaatggtgaagaactcagttgaagcagaagcaaagatt
gtccagctcgagaagatggtggcagagaaagaagaagagctagcagctagagtgcacaaa
aagaagccaagattgtccactcttttttttcgtttcagaaaaaagagtgcaggagaagag
agaagccatcaagcagctgagtga
DBGET
integrated database retrieval system
