Setaria viridis (green foxtail): 117857675
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Entry
117857675 CDS
T07951
Name
(RefSeq) RGG repeats nuclear RNA binding protein A-like
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117857675
Spliceosome [BR:
svs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117857675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Motif
Other DBs
NCBI-GeneID:
117857675
NCBI-ProteinID:
XP_034596366
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All DBs
Position
5:complement(27204699..27209034)
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AA seq
371 aa
AA seq
DB search
MGTKNQFDLLVDVDNDDPSHLIAAAEKKAAASPKPAPAAPAKLPTKPPPPAQAVKESRNH
GAPARDGAGRGGPGRGRGGFRGGRTGPRREYGEGDANGVEGGYGGGSFGDGFPRREDGEG
RAMERGRGPRQPYRGGGRRGGYTDGEGGDESGRPPRRAYERHSGTGRGYEMKREGAGRGN
WGTVTDEAQETLEAVNTEGTPAVAEDENKLEEVPHSEVEKGKEGEPTEEEEPEDKEMTLE
EYEKVLEEKRKALLGLKTEVRKVEVDKELQSMQQLSVKKGSDEIFIKLGSDKEKKKENAE
RDERAKKSVSINEFLKPAEGERYYSPGGRGRGRGRGRGDRGGFRSGYSPREPAALAPAIQ
DQAQFPSLGGK
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgaagaaccagttcgacctcctcgtcgacgtcgacaacgacgacccctcgcac
ctcatcgccgccgccgagaagaaggcggctgcgtcgcccaagccggcgcccgccgccccg
gcgaagctgcccaccaagccgccgccgcccgcgcaggctgtaaaggagtccaggaaccac
ggcgctccagctcgcgatggggcaggacgaggtggaccagggcgtggtagaggtggcttc
cgtggaggcaggacgggcccaaggcgtgaatatggtgagggtgatgccaatggtgttgag
ggaggttatggcggaggcagctttggagatggtttcccgcgaagagaggatggtgaagga
agggctatggaaaggggccgtggaccacgtcagccttaccgtggtggtggccgccgtggc
ggctacactgatggggagggtggtgatgagtctggtcgcccccctcgccgggcttatgag
cgccacagcggtacagggagaggatatgagatgaagcgtgagggggctggccgtggcaac
tggggaactgtaactgatgaagcacaagaaacattagaagctgttaatactgagggaact
cctgctgtagctgaggatgaaaacaagctggaggaggtgccacattctgaggttgagaag
ggcaaggaaggcgaaccaactgaagaggaggagcctgaagataaggagatgacattggaa
gaatatgagaaagtactggaagagaagaggaaagctttacttggattaaagactgaagtg
agaaaggttgaggtggacaaggagttgcagtccatgcaacaactttcagtgaaaaagggc
tccgatgagatcttcatcaagctgggttctgacaaagagaagaagaaagaaaatgctgaa
agggatgagcgcgccaagaagtctgtcagcataaatgaattcctgaagccagcagagggc
gaaaggtactacagccctggtgggcgtggacgtggtcgtggcaggggtcgtggtgaccgc
ggtggattccgtagcggttacagccctcgcgagccagctgctctggcgccggcgattcaa
gatcaagcccagtttccctcgctaggtgggaagtga
DBGET
integrated database retrieval system
