Setaria viridis (green foxtail): 26047827
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Entry
26047827 CDS
T07951
Symbol
rbcL, APY47_gp058
Name
(RefSeq) ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00630
Glyoxylate and dicarboxylate metabolism
svs00710
Carbon fixation in photosynthetic organisms
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs01200
Carbon metabolism
Module
svs_M00165
Reductive pentose phosphate cycle (Calvin cycle)
svs_M00532
Photorespiration
svs_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
26047827 (rbcL)
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
26047827 (rbcL)
Enzymes [BR:
svs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
26047827 (rbcL)
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Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-GeneID:
26047827
NCBI-ProteinID:
YP_009172148
UniProt:
A0A0U2KND4
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Position
Pltd:55739..57166
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AA seq
475 aa
AA seq
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MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE
SSTGTWTTVWTDGLTSLDRYKGRCYHIEPVPGEADQYICYIAYPLDLFEEGSVTNMFTSI
VGNVFGFKALRALRLEDLRIPTAYAKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL
SAKNYGRACYECLRGGLDFTKDDENVNSQPFMRWRDRFVFCAEAIYKAQAETGEIKGHYL
NATAGTCEEMIKRAAFARELGVPIVMHDYLTGGFTANTSLSYYCRDNGLLLHIHRAMHAV
IDRQKNHGMHFRVLAKALRMSGGDHIHSGTVVGKLEGEREITLGFVDLLRDDFIEKDRSR
GIFFTQDWASMPGVIPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAAAN
RVALEACVQARNEGRDLAREGNEIIKAACKWSPELAAACEVWKEIKFEFEAMDTL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccacaaacagaaactaaagcaagtgttggatttaaagctggtgttaaggattat
aaattgacttactacaccccggagtacgaaaccaaggatactgatatcttggcagcattc
cgagtaactcctcagcccggggttccgcctgaagaagcaggggctgcagtagctgcggaa
tcttctactggtacatggacaactgtttggactgatggacttaccagtcttgatcgttac
aaaggacgatgctatcacatcgagcccgttcctggggaggcagatcaatatatctgttat
atagcttatccattagacctatttgaagagggttctgttactaacatgtttacttccatt
gtgggtaacgtgtttggtttcaaagccctacgcgctctacgtttggaggatctacgaatt
cccactgcttatgcaaaaactttccaaggtccgcctcacggtatccaagttgaaagggat
aagttgaacaagtatggtcgtcctttattgggatgtactattaaaccaaaattgggatta
tccgcaaaaaattacggtagagcgtgttatgagtgtctacgcggtggacttgattttacc
aaagatgatgaaaacgtaaactcacaaccatttatgcgctggagagaccgttttgtcttt
tgtgctgaagcaatttataaagcacaagcagaaactggtgaaattaaggggcattacttg
aatgcgactgcaggtacatgcgaagaaatgattaagagagctgcatttgcaagggaatta
ggggttcctattgtaatgcatgactacttaactggaggattcaccgcaaatactagtttg
tcttattattgccgcgacaacggcctacttcttcacattcaccgagcaatgcatgcagtt
attgatagacagaaaaatcatggtatgcatttccgtgtattagctaaagcattgcgtatg
tcggggggagatcatatccactccggtacagtagtaggtaagttagaaggggaacgcgaa
ataactttaggttttgttgatttattgcgcgatgattttattgaaaaagatcgttctcgc
ggtatctttttcactcaggactgggcatccatgccaggtgttataccggtggcttcaggg
ggtattcatgtttggcatatgccagctctgaccgaaatctttggagacgattctgtatta
caatttggtggaggaactttaggacatccttggggaaatgcacctggtgcagcagctaat
cgtgtggctttagaagcctgtgtacaagcccgtaacgaagggcgcgatcttgctcgtgaa
ggtaatgaaattatcaaagcagcttgcaaatggagtcctgaactagccgcagcttgtgaa
gtatggaaggagatcaaatttgagttcgaagcgatggataccctatag
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