KEGG   Streptomyces vietnamensis: SVTN_09410
Entry
SVTN_09410        CDS       T03586                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
svt  Streptomyces vietnamensis
Pathway
svt03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:svt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SVTN_09410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:svt03400]
    SVTN_09410
DNA repair and recombination proteins [BR:svt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SVTN_09410
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SVTN_09410
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_21 AAA_29 RsgA_GTPase AAA_16 nSTAND1 AAA_33 AAA_22 APS_kinase DnaJ_CXXCXGXG NACHT Viral_helicase1 ExoX-like_C cobW BCA_ABC_TP_C
Other DBs
NCBI-ProteinID: AJF64612
UniProt: A0A0B5I2C1
LinkDB
Position
complement(2134692..2137721)
AA seq 1009 aa
MADRLIVRGAREHNLKNVSLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARIGKPH
CPECRRPISRQSPQAIVDKVLELPEGSRFQVLSPLVRERKGEFVDLFADLQTKGYSRARV
DGQTIQLSEPPTLKKQEKHTIEVVVDRLTVKDSAKRRLTDSVETALGLSGGMVVLDFVDL
AEDDPEREKMYSEHLYCPYDDLSFEELEPRSFSFNSPFGACPDCTGIGTRMEVDPELVVP
DEERSLDEGAIHPWSHGHTKEYFGRLIGGLSQALGFRTDIPYAGLPQRAKKALMYGHKTQ
VEVRYRNRYGRERAYTTPAFEGAVSFVKRRHSEAESDSSRERFEGYMREVPCPTCEGTRL
KPIVLAVTVMEKSIAEVSAMSISDCAEFLSRLTLNARDKKIAERVLKEVNERLRFLVDVG
LDYLSLNRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLVRL
RDMGNTLIVVEHDEDTIKVADWVVDIGPGAGEHGGKVVHSGSLKELLANEESMTGQYLSG
RRSIATPDIRRPVDPGRRLTVHGARENNLRDIDVSFPLGVLTAVTGVSGSGKSTLVNDIL
YTHLARELNGAKSVPGRHTRVDGDELVDKVVHVDQSPIGRTPRSNPATYTGVFDHVRKLF
AETMEAKVRGYLPGRFSFNVKGGRCENCSGDGTIKIEMNFLPDVYVPCEVCHGDRYNRET
LEVHYKGKSIAEVLNMPIEEALDFFEAVPTIARHLRTLNEVGLGYVRLGQSAPTLSGGEA
QRVKLASELQKRSTGRTVYVLDEPTTGLHFEDISKLIKVLSNLVDKGNSVIVIEHNLDVI
KTADWVIDMGPEGGSGGGLVIAEGTPEEVASVPASHTGKFLREILGADRISDAATIPAAR
GTKKAAAKKTAAKTVAAKAPAKKAATAKVAAPAKKAATAKKATARARKA
NT seq 3030 nt   +upstreamnt  +downstreamnt
gtggccgaccgtctcatcgtccgtggcgctcgcgagcacaacctcaagaacgtctcgctc
gacctcccgcgtgactccctcatcgtcttcaccgggctctcggggtcgggcaagtcctcc
ctcgcgttcgacacgatcttcgccgaggggcagcgccggtacgtcgagtcgctctcctcg
tacgcccggcagttcctcggccagatggacaagccggacgtcgacttcatcgaaggtctc
tcgcccgccgtctccatcgaccagaagtcgacctcgcgcaacccgcgctcgacggtcggc
accatcacggaggtctacgactacctccgtctgctcttcgcccgcatcggcaagccgcac
tgtcccgagtgccgccgccccatctcccgccagtcgccgcaggccatcgtcgacaaggtc
ctggagctccccgagggcagccgcttccaggtgctctccccgctcgtgcgcgagcggaag
ggcgagttcgtcgacctcttcgccgacctccagaccaagggctacagccgcgcccgcgtc
gacgggcagacgatccagctcagcgagccgccgacgctgaagaagcaggagaagcacacg
atcgaggtggtcgtcgaccgcctcaccgtgaaggacagcgccaagcgccggctcaccgac
tccgtcgagaccgcgctcggactctccggcggcatggtcgtgctcgacttcgtcgacctc
gccgaggacgaccccgagcgcgagaagatgtactcggagcacctctactgcccgtacgac
gacctgtccttcgaggagctggagccgcgctccttctccttcaactcgcccttcggcgcc
tgccccgactgcaccggcatcggcacccgcatggaggtcgacccggagctggtcgtcccc
gacgaggagaggtccctcgacgagggcgccatccacccctggtcgcacgggcacaccaag
gagtacttcggccggctcatcggcggcctctcccaggccctcggcttccgcacggacatc
ccgtacgcgggtcttccgcagcgcgccaagaaggccctgatgtacggccacaagacccag
gtcgaggtccgctaccgcaacaggtacggccgcgagcgggcgtacaccaccccggccttc
gagggcgccgtctccttcgtcaagcggcggcacagcgaggccgagagcgactccagccgc
gagcgcttcgagggctacatgcgcgaggtgccctgccccacctgcgagggcacccgcctc
aagccgatcgtcctcgcggtcacggtcatggagaagtccatcgccgaggtctccgcgatg
tcgatcagcgactgcgccgagttcctctcccgcctcacgctcaacgcccgcgacaagaag
atcgccgagcgggtcctcaaggaggtcaacgagcggctgcgcttcctcgtcgacgtcggc
ctcgactacctctcgctcaaccgggcggcgggcacgctctccggcggcgaggcccagcgc
atccggctcgccacccagatcggctccggcctcgtcggcgtgctgtacgtgctcgacgag
ccgtccatcggcctccaccagcgcgacaaccaccggctcatcgagaccctggtccggctc
cgggacatgggcaacacgctcatcgtcgtcgagcacgacgaggacaccatcaaggtcgcc
gactgggtcgtcgacatcggccccggcgccggcgagcacggcggcaaggtcgtccactcc
ggctccctgaaggagctcctcgccaacgaggagtcgatgaccgggcagtacctgtccggc
cgccggtcgatcgccaccccggacatccgccgcccggtggaccccggacgccggctcacc
gtgcacggggcccgcgagaacaacctgcgggacatcgacgtctccttcccgctgggcgtc
ctcaccgccgtcaccggagtctccggctccggcaagtcgaccctggtcaacgacatcctc
tacacccacctggcgcgcgagctgaacggcgccaagtcggtgcccggacggcacacgcgc
gtggacggcgacgagctcgtcgacaaggtcgtgcacgtcgaccagtccccgatcggccgc
accccgcggtcgaacccggcgacgtacaccggcgtcttcgaccacgtccgcaagctcttc
gccgagacgatggaggccaaggtccggggctacctgcccggccgcttctccttcaacgtc
aagggcggccgctgcgagaactgctccggcgacggcacgatcaagatcgagatgaacttc
ctcccggacgtgtacgtcccgtgcgaggtctgccacggcgaccggtacaaccgggagacc
ctggaggtccactacaagggcaagtccatcgccgaagtcctgaacatgccgatcgaggag
gccctcgacttcttcgaggccgtcccgaccatcgcgcgccacctgcgcacgctcaacgag
gtcggcctcgggtacgtccggctcggccagtccgcgccgacgctctccggcggcgaggcg
cagcgcgtgaagctcgcctccgagctccagaagcgctcgacgggccgcacggtctacgtc
ctggacgagccgaccaccggtctccacttcgaggacatctcgaagctgatcaaggtcctg
tccaacctggtcgacaagggcaactcggtgatcgtcatcgagcacaacctcgatgtcatc
aagaccgcggactgggtcatcgacatgggtccggagggcggcagcggcggcggtctggtg
atcgccgagggcacgccggaggaggtcgcctcggtcccggcgagccacaccggcaagttc
ctccgcgagatcctcggcgccgaccggatcagcgacgccgcgacgatccccgcggcgcgc
gggacgaagaaggcggccgcgaagaagacggcggcgaagacggtcgcggcgaaggccccc
gccaagaaggcggccacggccaaggtcgcggcccccgcgaagaaggcggccacggccaag
aaggcgacggcccgcgcccgcaaggcgtga

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