Streptomyces vietnamensis: SVTN_09410
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Entry
SVTN_09410 CDS
T03586
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
svt
Streptomyces vietnamensis
Pathway
svt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
svt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SVTN_09410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svt03400
]
SVTN_09410
DNA repair and recombination proteins [BR:
svt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SVTN_09410
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SVTN_09410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
AAA_29
RsgA_GTPase
AAA_16
nSTAND1
AAA_33
AAA_22
APS_kinase
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
ExoX-like_C
cobW
BCA_ABC_TP_C
Motif
Other DBs
NCBI-ProteinID:
AJF64612
UniProt:
A0A0B5I2C1
LinkDB
All DBs
Position
complement(2134692..2137721)
Genome browser
AA seq
1009 aa
AA seq
DB search
MADRLIVRGAREHNLKNVSLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARIGKPH
CPECRRPISRQSPQAIVDKVLELPEGSRFQVLSPLVRERKGEFVDLFADLQTKGYSRARV
DGQTIQLSEPPTLKKQEKHTIEVVVDRLTVKDSAKRRLTDSVETALGLSGGMVVLDFVDL
AEDDPEREKMYSEHLYCPYDDLSFEELEPRSFSFNSPFGACPDCTGIGTRMEVDPELVVP
DEERSLDEGAIHPWSHGHTKEYFGRLIGGLSQALGFRTDIPYAGLPQRAKKALMYGHKTQ
VEVRYRNRYGRERAYTTPAFEGAVSFVKRRHSEAESDSSRERFEGYMREVPCPTCEGTRL
KPIVLAVTVMEKSIAEVSAMSISDCAEFLSRLTLNARDKKIAERVLKEVNERLRFLVDVG
LDYLSLNRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLVRL
RDMGNTLIVVEHDEDTIKVADWVVDIGPGAGEHGGKVVHSGSLKELLANEESMTGQYLSG
RRSIATPDIRRPVDPGRRLTVHGARENNLRDIDVSFPLGVLTAVTGVSGSGKSTLVNDIL
YTHLARELNGAKSVPGRHTRVDGDELVDKVVHVDQSPIGRTPRSNPATYTGVFDHVRKLF
AETMEAKVRGYLPGRFSFNVKGGRCENCSGDGTIKIEMNFLPDVYVPCEVCHGDRYNRET
LEVHYKGKSIAEVLNMPIEEALDFFEAVPTIARHLRTLNEVGLGYVRLGQSAPTLSGGEA
QRVKLASELQKRSTGRTVYVLDEPTTGLHFEDISKLIKVLSNLVDKGNSVIVIEHNLDVI
KTADWVIDMGPEGGSGGGLVIAEGTPEEVASVPASHTGKFLREILGADRISDAATIPAAR
GTKKAAAKKTAAKTVAAKAPAKKAATAKVAAPAKKAATAKKATARARKA
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaccgtctcatcgtccgtggcgctcgcgagcacaacctcaagaacgtctcgctc
gacctcccgcgtgactccctcatcgtcttcaccgggctctcggggtcgggcaagtcctcc
ctcgcgttcgacacgatcttcgccgaggggcagcgccggtacgtcgagtcgctctcctcg
tacgcccggcagttcctcggccagatggacaagccggacgtcgacttcatcgaaggtctc
tcgcccgccgtctccatcgaccagaagtcgacctcgcgcaacccgcgctcgacggtcggc
accatcacggaggtctacgactacctccgtctgctcttcgcccgcatcggcaagccgcac
tgtcccgagtgccgccgccccatctcccgccagtcgccgcaggccatcgtcgacaaggtc
ctggagctccccgagggcagccgcttccaggtgctctccccgctcgtgcgcgagcggaag
ggcgagttcgtcgacctcttcgccgacctccagaccaagggctacagccgcgcccgcgtc
gacgggcagacgatccagctcagcgagccgccgacgctgaagaagcaggagaagcacacg
atcgaggtggtcgtcgaccgcctcaccgtgaaggacagcgccaagcgccggctcaccgac
tccgtcgagaccgcgctcggactctccggcggcatggtcgtgctcgacttcgtcgacctc
gccgaggacgaccccgagcgcgagaagatgtactcggagcacctctactgcccgtacgac
gacctgtccttcgaggagctggagccgcgctccttctccttcaactcgcccttcggcgcc
tgccccgactgcaccggcatcggcacccgcatggaggtcgacccggagctggtcgtcccc
gacgaggagaggtccctcgacgagggcgccatccacccctggtcgcacgggcacaccaag
gagtacttcggccggctcatcggcggcctctcccaggccctcggcttccgcacggacatc
ccgtacgcgggtcttccgcagcgcgccaagaaggccctgatgtacggccacaagacccag
gtcgaggtccgctaccgcaacaggtacggccgcgagcgggcgtacaccaccccggccttc
gagggcgccgtctccttcgtcaagcggcggcacagcgaggccgagagcgactccagccgc
gagcgcttcgagggctacatgcgcgaggtgccctgccccacctgcgagggcacccgcctc
aagccgatcgtcctcgcggtcacggtcatggagaagtccatcgccgaggtctccgcgatg
tcgatcagcgactgcgccgagttcctctcccgcctcacgctcaacgcccgcgacaagaag
atcgccgagcgggtcctcaaggaggtcaacgagcggctgcgcttcctcgtcgacgtcggc
ctcgactacctctcgctcaaccgggcggcgggcacgctctccggcggcgaggcccagcgc
atccggctcgccacccagatcggctccggcctcgtcggcgtgctgtacgtgctcgacgag
ccgtccatcggcctccaccagcgcgacaaccaccggctcatcgagaccctggtccggctc
cgggacatgggcaacacgctcatcgtcgtcgagcacgacgaggacaccatcaaggtcgcc
gactgggtcgtcgacatcggccccggcgccggcgagcacggcggcaaggtcgtccactcc
ggctccctgaaggagctcctcgccaacgaggagtcgatgaccgggcagtacctgtccggc
cgccggtcgatcgccaccccggacatccgccgcccggtggaccccggacgccggctcacc
gtgcacggggcccgcgagaacaacctgcgggacatcgacgtctccttcccgctgggcgtc
ctcaccgccgtcaccggagtctccggctccggcaagtcgaccctggtcaacgacatcctc
tacacccacctggcgcgcgagctgaacggcgccaagtcggtgcccggacggcacacgcgc
gtggacggcgacgagctcgtcgacaaggtcgtgcacgtcgaccagtccccgatcggccgc
accccgcggtcgaacccggcgacgtacaccggcgtcttcgaccacgtccgcaagctcttc
gccgagacgatggaggccaaggtccggggctacctgcccggccgcttctccttcaacgtc
aagggcggccgctgcgagaactgctccggcgacggcacgatcaagatcgagatgaacttc
ctcccggacgtgtacgtcccgtgcgaggtctgccacggcgaccggtacaaccgggagacc
ctggaggtccactacaagggcaagtccatcgccgaagtcctgaacatgccgatcgaggag
gccctcgacttcttcgaggccgtcccgaccatcgcgcgccacctgcgcacgctcaacgag
gtcggcctcgggtacgtccggctcggccagtccgcgccgacgctctccggcggcgaggcg
cagcgcgtgaagctcgcctccgagctccagaagcgctcgacgggccgcacggtctacgtc
ctggacgagccgaccaccggtctccacttcgaggacatctcgaagctgatcaaggtcctg
tccaacctggtcgacaagggcaactcggtgatcgtcatcgagcacaacctcgatgtcatc
aagaccgcggactgggtcatcgacatgggtccggagggcggcagcggcggcggtctggtg
atcgccgagggcacgccggaggaggtcgcctcggtcccggcgagccacaccggcaagttc
ctccgcgagatcctcggcgccgaccggatcagcgacgccgcgacgatccccgcggcgcgc
gggacgaagaaggcggccgcgaagaagacggcggcgaagacggtcgcggcgaaggccccc
gccaagaaggcggccacggccaaggtcgcggcccccgcgaagaaggcggccacggccaag
aaggcgacggcccgcgcccgcaaggcgtga
DBGET
integrated database retrieval system