KEGG   Streptomyces violaceoruber: B1H20_32510
Entry
B1H20_32510       CDS       T05124                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
svu  Streptomyces violaceoruber
Pathway
svu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:svu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    B1H20_32510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:svu03400]
    B1H20_32510
DNA repair and recombination proteins [BR:svu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     B1H20_32510
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      B1H20_32510
SSDB
Motif
Pfam: UvrA_DNA-bind ABC_tran AAA_21 AAA_29 SMC_N nSTAND1 DnaJ_CXXCXGXG AAA_16 AAA_25 RsgA_GTPase DUF4350
Other DBs
NCBI-ProteinID: ARF65619
UniProt: A0A1V0UK38
LinkDB
Position
complement(7469469..7471886)
AA seq 805 aa
MHSPHDPYVRVRGAREHNLKDVRVDIPRDTLTVFTGVSGSGKSSLAFGTIYAEAQRRYFE
SVAPYARRLIHQVGAPAVGEITGLPPAVSLEQRRSAPGSRSSVGTVTTLSNSLRMLFSRA
GDYPPGAERLDSDSFSPNTAVGACPECHGLGRIHRTDEGLLVPDPSLSIREGAIAAWPGA
WQGKNLRDVLDALGYDVDRPWRELDAKDREWILFTDEQPVVTVHPVRDAGRIQRPYQGTY
MSARRYVLHTFADTKSRSLRAKAERFLTSAPCPVCGGSRLRPEAMAVTFAGRTIAELAGL
PLSVLAEVLEGADGEETARVLTADLLARIGTVTELGLGYLSLDRTAPTLSSGELQRLRMA
TQLRSGLFGVVYVLDEPSAGLHPADTEALLGVLGRLKEAGNSVFVVEHQMDVVRRADWLV
DVGPLAGEHGGRVLHSGPPEGLAEVPESATRRFLFPEAGPGTAPVREKRAPSGWIRLTGV
ERHNVRGVDAAFPLGVFTAVTGVSGSGKSTLVGQVLAGVLADRQAGEEPVAGDRYCATAT
GLEAVDRLVQVDQKPIGRTPRSNLATYTGLFDTVRKLFARTEKARERGYGAGRFSFNVSG
GRCETCQGEGFVSVELLFLPSTYAPCPDCHGARYNPETLEVTLEGLTIAQVLDLTVESAA
EFFSGTPAAERPLRTLLDVGLGYLRLGQPATELSGGEAQRIKLAAELQRTRRGHTLYLLD
EPTTGLHPADVEVLMRQLHALVDAGNTVVVVEHDMAVVAGADHVVDMGPEGGDRGGRIVA
AGTPEEVAKTAGSRTAPYLAKALRR
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgcattccccccacgatccgtacgtccgggtgcgcggcgcccgcgagcacaacctgaag
gacgtgcgggtcgacatcccacgcgacacgctgaccgtcttcaccggcgtgtcggggtcc
gggaagtcctccctggccttcgggaccatctacgcggaggcgcagcggcggtacttcgag
tccgtcgccccgtacgcgaggcggctcatccaccaggtgggcgcgccggccgtcggggag
atcaccgggctgccgcccgccgtctcgctggagcagcggcgatcggcgccggggtcccgg
tcgtcggtggggacggtgaccaccctctccaactcgctgcggatgctcttctcccgcgcg
ggcgactatccgccgggggccgagcgcctggattccgactcgttctcgcccaacacggcg
gtcggggcgtgtccggagtgccacggactggggcggatccaccgcacggacgaggggctg
ctggtgcccgacccctccctgtcgatccgggagggggcgatcgccgcctggccgggcgcc
tggcagggcaagaacctgcgggacgtcctggacgcgctcgggtacgacgtcgaccggccg
tggcgcgagctggacgcgaaggaccgggagtggatcctgttcaccgacgagcagccggtg
gtcacggtgcatccggtgcgggacgcgggacggatccaacgcccgtaccagggcacgtac
atgagcgcccggcgctatgtgctgcacaccttcgccgacacgaagagccggtccctgcgg
gcgaaggcggaacgcttcctcaccagcgccccgtgcccggtctgcgggggcagccggctg
aggccggaggcgatggcggtgacgttcgcggggcggaccatcgcggagctggccgggttg
ccgctgtccgtactggccgaggtgctggagggggcggacggcgaggagacggcccgggtg
ctgacggccgatctgctggcgcggatcgggacggtgacggagctggggctcggctatctg
agtctggaccgcacggctccgacgctctcctcgggcgagctgcaacggctgcggatggcc
acccagctgaggtcgggcctgttcggcgtcgtctacgtcctggacgagccgtcggccggg
ctgcaccccgcggacaccgaggcgctgctcggcgtgctggggcggctcaaggaggcgggg
aactcggtgttcgtggtggagcaccagatggacgtggtgcggcgggcggactggctggtg
gacgtgggcccgctggccggggagcacggcgggcgggtgctgcacagcgggccgcccgag
gggctggccgaggtcccggagtcggcgacgcgccgcttcctgttccccgaggccggcccc
ggcaccgcaccggtacgggagaagcgggcgccgtccggatggatccggctcaccggggtg
gagcggcacaacgtgcggggcgtcgacgcggcgttcccgctcggggtgttcacggcggtg
accggagtctccggttcgggaaagtcgacgctggtgggccaggtgctcgccggggtgctg
gcggaccggcaggcgggcgaggagccggtggcgggtgaccggtactgcgcgacggccacc
gggctggaggcggtggaccggctcgtgcaggtggaccagaagcccatcgggcggacaccc
cgctccaatctggccacgtacaccggcctgttcgacacggtgcgcaagctgttcgcgcgg
acggagaaggcccgggagcgggggtacggcgcggggcggttctcgttcaacgtgagcggc
gggcggtgcgagacctgccagggcgaggggttcgtctcggtggagctgctgttcctgccc
agcacgtacgcgccgtgcccggactgtcacggcgcgcgctacaacccggagaccctggag
gtcaccctggagggtctgacgatcgcccaggtcctcgatctgaccgtggagtcggcggcg
gagttcttctccggcacgccggccgccgagcgcccgctgcggaccctgctggacgtgggg
ctcggctatctgcggctgggacagcccgccacggagctgtcgggcggcgaggcgcagcgg
atcaagttggcggccgagctccagcgcacccggcgcggtcacacgctgtatctgctggac
gagccgacgacggggctgcatccggccgatgtggaggtgttgatgcggcagttgcacgcg
ctggtcgacgccgggaacaccgtggtggtcgtggagcacgacatggcggtggtggcgggc
gccgaccacgtcgtggacatggggccggagggcggggaccggggcggccgaatcgtcgcg
gccggaacgcccgaggaggtggccaagacggccggaagccgtacggcgccgtacctcgcg
aaggcgctgcgccgctga

DBGET integrated database retrieval system