Streptomyces violaceoruber: B1H20_32510
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Entry
B1H20_32510 CDS
T05124
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
svu
Streptomyces violaceoruber
Pathway
svu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
svu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B1H20_32510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svu03400
]
B1H20_32510
DNA repair and recombination proteins [BR:
svu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B1H20_32510
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B1H20_32510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
ABC_tran
AAA_21
AAA_29
SMC_N
nSTAND1
DnaJ_CXXCXGXG
AAA_16
AAA_25
RsgA_GTPase
DUF4350
Motif
Other DBs
NCBI-ProteinID:
ARF65619
UniProt:
A0A1V0UK38
LinkDB
All DBs
Position
complement(7469469..7471886)
Genome browser
AA seq
805 aa
AA seq
DB search
MHSPHDPYVRVRGAREHNLKDVRVDIPRDTLTVFTGVSGSGKSSLAFGTIYAEAQRRYFE
SVAPYARRLIHQVGAPAVGEITGLPPAVSLEQRRSAPGSRSSVGTVTTLSNSLRMLFSRA
GDYPPGAERLDSDSFSPNTAVGACPECHGLGRIHRTDEGLLVPDPSLSIREGAIAAWPGA
WQGKNLRDVLDALGYDVDRPWRELDAKDREWILFTDEQPVVTVHPVRDAGRIQRPYQGTY
MSARRYVLHTFADTKSRSLRAKAERFLTSAPCPVCGGSRLRPEAMAVTFAGRTIAELAGL
PLSVLAEVLEGADGEETARVLTADLLARIGTVTELGLGYLSLDRTAPTLSSGELQRLRMA
TQLRSGLFGVVYVLDEPSAGLHPADTEALLGVLGRLKEAGNSVFVVEHQMDVVRRADWLV
DVGPLAGEHGGRVLHSGPPEGLAEVPESATRRFLFPEAGPGTAPVREKRAPSGWIRLTGV
ERHNVRGVDAAFPLGVFTAVTGVSGSGKSTLVGQVLAGVLADRQAGEEPVAGDRYCATAT
GLEAVDRLVQVDQKPIGRTPRSNLATYTGLFDTVRKLFARTEKARERGYGAGRFSFNVSG
GRCETCQGEGFVSVELLFLPSTYAPCPDCHGARYNPETLEVTLEGLTIAQVLDLTVESAA
EFFSGTPAAERPLRTLLDVGLGYLRLGQPATELSGGEAQRIKLAAELQRTRRGHTLYLLD
EPTTGLHPADVEVLMRQLHALVDAGNTVVVVEHDMAVVAGADHVVDMGPEGGDRGGRIVA
AGTPEEVAKTAGSRTAPYLAKALRR
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgcattccccccacgatccgtacgtccgggtgcgcggcgcccgcgagcacaacctgaag
gacgtgcgggtcgacatcccacgcgacacgctgaccgtcttcaccggcgtgtcggggtcc
gggaagtcctccctggccttcgggaccatctacgcggaggcgcagcggcggtacttcgag
tccgtcgccccgtacgcgaggcggctcatccaccaggtgggcgcgccggccgtcggggag
atcaccgggctgccgcccgccgtctcgctggagcagcggcgatcggcgccggggtcccgg
tcgtcggtggggacggtgaccaccctctccaactcgctgcggatgctcttctcccgcgcg
ggcgactatccgccgggggccgagcgcctggattccgactcgttctcgcccaacacggcg
gtcggggcgtgtccggagtgccacggactggggcggatccaccgcacggacgaggggctg
ctggtgcccgacccctccctgtcgatccgggagggggcgatcgccgcctggccgggcgcc
tggcagggcaagaacctgcgggacgtcctggacgcgctcgggtacgacgtcgaccggccg
tggcgcgagctggacgcgaaggaccgggagtggatcctgttcaccgacgagcagccggtg
gtcacggtgcatccggtgcgggacgcgggacggatccaacgcccgtaccagggcacgtac
atgagcgcccggcgctatgtgctgcacaccttcgccgacacgaagagccggtccctgcgg
gcgaaggcggaacgcttcctcaccagcgccccgtgcccggtctgcgggggcagccggctg
aggccggaggcgatggcggtgacgttcgcggggcggaccatcgcggagctggccgggttg
ccgctgtccgtactggccgaggtgctggagggggcggacggcgaggagacggcccgggtg
ctgacggccgatctgctggcgcggatcgggacggtgacggagctggggctcggctatctg
agtctggaccgcacggctccgacgctctcctcgggcgagctgcaacggctgcggatggcc
acccagctgaggtcgggcctgttcggcgtcgtctacgtcctggacgagccgtcggccggg
ctgcaccccgcggacaccgaggcgctgctcggcgtgctggggcggctcaaggaggcgggg
aactcggtgttcgtggtggagcaccagatggacgtggtgcggcgggcggactggctggtg
gacgtgggcccgctggccggggagcacggcgggcgggtgctgcacagcgggccgcccgag
gggctggccgaggtcccggagtcggcgacgcgccgcttcctgttccccgaggccggcccc
ggcaccgcaccggtacgggagaagcgggcgccgtccggatggatccggctcaccggggtg
gagcggcacaacgtgcggggcgtcgacgcggcgttcccgctcggggtgttcacggcggtg
accggagtctccggttcgggaaagtcgacgctggtgggccaggtgctcgccggggtgctg
gcggaccggcaggcgggcgaggagccggtggcgggtgaccggtactgcgcgacggccacc
gggctggaggcggtggaccggctcgtgcaggtggaccagaagcccatcgggcggacaccc
cgctccaatctggccacgtacaccggcctgttcgacacggtgcgcaagctgttcgcgcgg
acggagaaggcccgggagcgggggtacggcgcggggcggttctcgttcaacgtgagcggc
gggcggtgcgagacctgccagggcgaggggttcgtctcggtggagctgctgttcctgccc
agcacgtacgcgccgtgcccggactgtcacggcgcgcgctacaacccggagaccctggag
gtcaccctggagggtctgacgatcgcccaggtcctcgatctgaccgtggagtcggcggcg
gagttcttctccggcacgccggccgccgagcgcccgctgcggaccctgctggacgtgggg
ctcggctatctgcggctgggacagcccgccacggagctgtcgggcggcgaggcgcagcgg
atcaagttggcggccgagctccagcgcacccggcgcggtcacacgctgtatctgctggac
gagccgacgacggggctgcatccggccgatgtggaggtgttgatgcggcagttgcacgcg
ctggtcgacgccgggaacaccgtggtggtcgtggagcacgacatggcggtggtggcgggc
gccgaccacgtcgtggacatggggccggagggcggggaccggggcggccgaatcgtcgcg
gccggaacgcccgaggaggtggccaagacggccggaagccgtacggcgccgtacctcgcg
aaggcgctgcgccgctga
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