Shewanella woodyi: Swoo_0888
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Entry
Swoo_0888 CDS
T00676
Name
(GenBank) putative diguanylate cyclase
Organism
swd
Shewanella woodyi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_4
PAS_8
GGDEF
sCache_like
PAS_11
Motif
Other DBs
NCBI-ProteinID:
ACA85182
UniProt:
B1KF31
LinkDB
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Position
complement(1181595..1183811)
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AA seq
738 aa
AA seq
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MLTRKQPLLIAAQGIHWSHQRLLAVAAQLCLLIISVTLLSNVIITLGERRLQEDWATQRY
SELQAVGTVIADKVAFQQFRTQMFAKSELLKRYLDLPSKEREEKLKQNWNIIRDNIPELL
DMALFDPQGKFKFATSDDFGHEPIPAALLGSSSNMGGNEIYTSPLEFSPINGKLEPYMYQ
LAWLENPDQSIRGYLVTYNSMAQMLKSIKPAYSSSQSPLLMLDTQGLLYAGAESSPSLQR
IPDTMGGSLRQSYPALWRKMATSNFGQFHGDNATFVYLKVELTTQYETRREYFLVSYVRN
DDIAAKFTEWRSLLIIGASVLTILASILIFLSHLYRLEQASRMYSIELSSRLFHRDVGCI
IVNDNSRVISANNRAADQLGLPKDELLDRSLQRLLHLEDDEYTEIMLHVQQHGEWKGEFD
SGAETQAQLIAHIKTQHDSVKTKAYLLITFEDVSELYSAKNDAYINQMLNDSSVATALIQ
ADGHLVRTNHAFDQQMQIQQSPTKNLTELLNPDIGSKWSQILQQIILQGSWKGQVLCTQS
HMLSDCLQATLKGHLDSSGEIEYIVCTFEQAIQKESRSDRGELVPHRTTVLVNLRDLESY
FKSLPSNKRESSSLILMDITAESMLSHMSDIGQLENRQKEVELKILRELPAGYQMSHWQL
GKLIIILPDTDADKAHHFAIKSMSNLSDIGLSEGICMGIAAYQSGQSLEQYLSNAEVALK
RAKQTGEQMICQAFTRVI
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgcgaaaacaacctcttctaatcgcagcccaagggatccattggtcccaccaa
cgtttgctagccgtcgcagctcagctttgcttactcatcataagtgtcaccctgttaagc
aatgtgattattacactaggtgagcgtcgtcttcaggaagattgggccactcagagatac
agtgaacttcaagctgttggaacagtcattgccgacaaagtcgcttttcaacaatttcgt
actcaaatgttcgccaaatcagagctgctaaagcgctatcttgatcttcccagcaaggag
agagaggagaagctcaaacaaaactggaacattatacgagacaacattcctgaactgctt
gatatggctctgttcgatccacaaggtaaatttaaatttgccaccagtgatgactttggt
catgaaccaatacctgcagcgctgcttggatcatcgagcaatatgggaggtaatgagatc
tatacctctccactcgaatttagcccgataaatggcaaactagaaccctacatgtatcaa
cttgcctggcttgaaaacccagatcaaagcattagaggatacctagtaacctacaactcc
atggcgcagatgttaaagagtatcaaacctgcatactcaagcagccagtcacctctgttg
atgttagatacccaaggcttgctgtacgcaggagccgagtctagcccttctctacagcga
atacctgatactatgggaggtagtttaagacagagctatcccgccctttggcgtaaaatg
gcaaccagcaactttggtcagtttcatggagacaatgccacatttgtctatctaaaagtc
gagctcaccacccaatatgaaacccgtagagagtatttccttgtttcatatgtacgcaac
gatgatattgcagcgaaattcaccgagtggcgtagcttactgataataggtgcatcagtg
ctgacaatccttgcttcaatactcatattcctcagccacctttatcgccttgagcaagca
tcgcggatgtacagtatcgaactatcaagccgcctatttcatcgtgatgtcggttgcatt
attgtcaatgataatagccgtgttatctcagccaataaccgagctgccgatcaattggga
ctacccaaagatgagttactcgaccgcagcctgcagcggttattgcatctcgaagatgat
gaatacacagagatcatgcttcatgttcaacaacatggagagtggaaaggtgagttcgat
tcaggcgctgagactcaagctcaactgattgctcatattaaaacccagcatgactcagtg
aaaactaaagcctatcttttgatcacatttgaagatgtcagtgagctttacagcgctaaa
aatgatgcgtatatcaatcagatgcttaatgatagctcagttgcaaccgcgttaattcaa
gccgatggccacttagtccgcacgaatcacgcctttgatcagcagatgcaaatacagcaa
agccccactaaaaacctgactgagctgctcaatcccgatataggaagtaaatggtcacag
atacttcagcagataattcttcagggtagctggaaaggacaggtactctgtacccaaagc
catatgctcagcgattgccttcaagcgaccttaaaggggcatttggactcctcgggagag
attgaatatatcgtatgtacctttgaacaagctatccaaaaagagtcccgctcagatcgc
ggtgaactagttccacatagaaccacagtcttagtcaacctaagggatctagagagctat
tttaagtcactcccttcgaataagagagagagttcaagcttgatactgatggatatcacc
gcagagagcatgctcagccatatgagtgatatcggccagctagagaacaggcagaaagag
gtcgagttgaagatccttagggagctacctgcgggttatcagatgtcccattggcaactt
ggaaagctcatcatcattttgccagataccgatgccgataaagcgcaccatttcgccata
aaatccatgagtaacttaagtgatattgggctaagtgaagggatatgtatggggattgcc
gcctaccaaagcggccaatcattggagcaatatctaagtaatgcagaggtggcacttaaa
cgcgctaagcaaacaggcgagcagatgatctgtcaggcatttaccagggtaatatag
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