Shewanella woodyi: Swoo_3135
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Entry
Swoo_3135 CDS
T00676
Name
(GenBank) Pyridoxal-dependent decarboxylase
KO
K24264
aspartate 1-decarboxylase [EC:
4.1.1.11
]
Organism
swd
Shewanella woodyi
Pathway
swd00770
Pantothenate and CoA biosynthesis
swd01100
Metabolic pathways
swd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00770 Pantothenate and CoA biosynthesis
Swoo_3135
Enzymes [BR:
swd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.11 aspartate 1-decarboxylase
Swoo_3135
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
SepSecS
P53_tetramer
Motif
Other DBs
NCBI-ProteinID:
ACA87406
UniProt:
B1KMM8
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Position
3845726..3847381
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AA seq
551 aa
AA seq
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MSMTQRRATASEEALLRIFTVPEAPDSTLSVIEQNISQNLMGFLQESVVAVEKPLSEIER
DFQQHQIPSAPQFVSDYADDMMKTLVAHSVHTSAPSFIGHMTSALPYFVLPLSKMMVGLN
QNLVKIETSKAFTPLERQVLGMMHHLIYSESDEFYQSWMHSANYSLGAFCSGGTVANITA
LWTARNQLLKADGDFKGVSAQGLVKGLRHYGYDDLAILVSQRGHYSLAKTADLLGIGREN
IIQIPTSSDNKVDVSKMREMAAKLNDDNIKVMAIVGVAGTTETGNIDPLDELATLASELN
CHFHVDAAWGGASLLSNKYRHLLKGIERADSVTIDAHKQMYVPMGAGMVIFKDPAFANAI
KHHAEYILRKGSKDLGSQTLEGSRPGMAMLVHACLQVIGRDGYEILINNSLEKARYFADL
IKQHQDFELVSEPELCLLTYRYVPKSVQMAMAQARENKDVQSLIEFNRLLDGLTKFVQKR
QREQGTSFVSRTRINPEAGIVDIKSVVFRVVLANPLTTHEILAQVLSEQSEIANQDNKFL
PQLLQLANLKN
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgacacaaagacgagccacagcttctgaagaggcactactgcgcatcttcacc
gtccctgaagcccctgattccaccttgagtgtcatcgaacaaaatatctcccagaaccta
atgggctttctgcaggagagtgtcgtggcggtcgaaaagcctctatctgagattgagcga
gatttccaacaacatcagatcccctcggcgccgcagtttgtctctgattacgccgacgat
atgatgaaaaccttggtcgcccactcagtacatacctcggctcctagttttatcgggcat
atgacctcagcccttccctattttgtcctaccgctgtctaagatgatggtagggttaaac
cagaacttggtaaaaatcgaaacatccaaagcctttactcctctggagcgtcaagtctta
ggcatgatgcatcatcttatctacagtgagagtgatgagttttatcaaagctggatgcac
agtgctaactactcgctgggggctttttgttctggcggtacagtggccaatatcacagcg
ctctggaccgctcgtaaccaactattaaaggctgatggcgactttaaaggggtatcggct
caaggtttagtgaaagggctacgccattatggttatgacgatttggcaatcttagtatct
cagcgtggccactattcactggccaaaaccgccgatctactcggcataggccgtgaaaat
atcattcagatcccaacatcgtctgataacaaggtcgatgtgagtaagatgcgcgagatg
gcagctaagctcaatgatgacaacatcaaggtgatggcaattgtcggtgttgctggcacg
actgaaaccggcaatatcgatcccttagatgagttagccaccttagcatctgagctaaat
tgtcatttccatgttgatgcagcatggggcggcgcatcgctgctatcaaataagtatcgt
cacctgcttaaagggatagagcgagcggactcagtcaccatagatgcacacaaacagatg
tacgtgcctatgggtgcgggtatggttatctttaaagatcccgcttttgccaacgccatt
aaacatcatgcagaatatattcttagaaaaggctctaaagatttaggcagtcagacattg
gagggctctcgccctggcatggcgatgctggttcatgcttgtcttcaggtgatcggtcgc
gacggttacgagatattaattaacaatagcttagagaaggcgcgatattttgccgatctg
ataaaacaacatcaagactttgagctggtatcagagcctgaactgtgtctactcacctac
cgctacgtaccaaagtcagttcaaatggctatggcacaagccagagagaacaaagatgtt
caatcccttatcgaatttaaccgtttattagatggcctcactaaatttgtgcagaaacgc
caacgagagcagggaacctcttttgtctcccgtactcgaatcaacccagaagcaggcata
gtggatataaagtctgtggtatttagggtcgtactcgccaatccattaactacccatgaa
atattagctcaagtcctaagcgagcaaagtgagatagccaatcaagataataagtttctg
ccgcagctattacagttagctaacttaaaaaattaa
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