Shewanella woodyi: Swoo_3862
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Entry
Swoo_3862 CDS
T00676
Name
(GenBank) 4-aminobutyrate aminotransferase
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
swd
Shewanella woodyi
Pathway
swd00250
Alanine, aspartate and glutamate metabolism
swd00280
Valine, leucine and isoleucine degradation
swd00310
Lysine degradation
swd00410
beta-Alanine metabolism
swd00640
Propanoate metabolism
swd00650
Butanoate metabolism
swd01100
Metabolic pathways
swd01120
Microbial metabolism in diverse environments
Module
swd_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Swoo_3862
00650 Butanoate metabolism
Swoo_3862
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Swoo_3862
00280 Valine, leucine and isoleucine degradation
Swoo_3862
00310 Lysine degradation
Swoo_3862
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Swoo_3862
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
swd01007
]
Swoo_3862
Enzymes [BR:
swd01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
Swoo_3862
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
Swoo_3862
2.6.1.48 5-aminovalerate transaminase
Swoo_3862
Amino acid related enzymes [BR:
swd01007
]
Aminotransferase (transaminase)
Class III
Swoo_3862
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
ACA88120
UniProt:
B1KFE5
LinkDB
All DBs
Position
complement(4706620..4707903)
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AA seq
427 aa
AA seq
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MTNSSLQARKVKAIARGQGNAYPVYVERAKNAELWDVEGKRYIDFGTGIAVCNTGHSHPK
IVAAVKAQLDNFSHTCVMVNPYESAVELAEKLTEIAPGESDKKAIFVTTGAEAVENCVKI
ARAHTGRRGVIAFNGGFHGRTNLTMALTGKITPYKHQFGPFAGDVFHAPFPIDYHNISVK
HSLDALNNLFKVDIAPCDVAAIIVEPVQGEGGFYAAPAEFLQALRSLCDDHGIVLIADEI
QTGFGRTGKMFSFEHAGVEPDLITMAKGIAGGFPIAAVVGKSEIMDAPLPGGLGGTYGGS
PVACVAALTVLDVIKEEGLVERAAQIGAIFNERLTALQAEYPQLIGEVRNQGAMIAMELV
SNGDCEQANTALTQAIIAKAAKYGLILLACGFYGNVIRFLPALTISDELINEGLDQFVRL
FGEAANC
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacagcagcttacaagcgagaaaagttaaggccatagctcgaggccaaggtaat
gcgtatccggtttatgttgagcgggctaagaatgcggagctctgggatgttgaggggaaa
cgttacatcgactttgggacaggtattgccgtatgtaatacagggcacagccatcctaaa
attgttgctgcggtaaaagcgcaactagataacttcagccatacctgtgtcatggttaac
ccctatgaatcggctgtcgagcttgcggaaaagctaacggagatagcaccaggtgagagt
gataaaaaggcgatttttgtcacgactggcgccgaagcggtggagaactgcgtcaaaatt
gctcgggctcatacggggcgtcgcggagttatcgcctttaatggtggtttccatggtcgc
actaacttgaccatggcattaactgggaagatcacaccctataaacatcagtttggccct
tttgctggcgatgtttttcatgctccttttccaattgattatcacaatatttcggttaaa
cactcccttgatgcattaaacaacctctttaaggtggatattgctccctgtgatgtggcg
gccattatcgttgagccagtacaaggtgaaggtggtttttatgccgcgcctgccgagttt
ttacaggcgttacgtagcttgtgtgatgaccatggtatcgtcttaattgctgatgagatc
caaacaggctttggccgaaccggtaagatgtttagctttgagcatgcgggtgttgaacct
gacctcatcactatggctaagggaattgcgggtggatttcctattgctgcggttgttggt
aagagcgagatcatggatgcgccgttaccaggaggactaggtggaacctatggtggctcg
cctgttgcctgtgtcgcagccctgaccgtgcttgatgtgatcaaagaggagggcttagtt
gagcgcgcagctcagattggcgcaattttcaatgagcgcttaacggctttgcaagctgag
tatccgcaactgattggtgaggtacgtaaccaaggtgccatgatcgccatggagttagtc
agtaatggtgactgtgagcaagctaataccgcgttaactcaagccattattgcgaaggcg
gcgaaatatggattgatactgctggcctgtggtttctatggcaatgtgatccgctttctg
ccagctctcaccatcagtgatgagcttatcaatgaaggcttagatcagtttgtgcgccta
tttggtgaggctgcaaactgctga
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