Rhizorhabdus wittichii RW1: Swit_1298
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Entry
Swit_1298 CDS
T00538
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi00020
Citrate cycle (TCA cycle)
swi00785
Lipoic acid metabolism
swi01100
Metabolic pathways
swi01110
Biosynthesis of secondary metabolites
swi01120
Microbial metabolism in diverse environments
swi01200
Carbon metabolism
swi01210
2-Oxocarboxylic acid metabolism
Module
swi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
swi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Swit_1298
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Swit_1298
Enzymes [BR:
swi01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
Swit_1298
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
ABQ67663
UniProt:
A0A9J9H9X9
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All DBs
Position
complement(1450264..1453176)
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AA seq
970 aa
AA seq
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MGIEGVEFDGPEGVSASFVESLYRQYRSDKSSVEPSWQDYFAGIEAGVSGPSWARTNWPP
TSTDALTAALDPTQMEVPAKPAKAGGAPAPAVSAPAAGATPAEVEQRALDSIRAIMLIRT
YRVRGHLLANLDPLGLSQREETEDLTPAWHGFTEADMDRQVYIAGFLGLDWATPREILAI
LRRNYCGNVGVEYMHIGDVEERRFLQARMEGKDAEISFTPEGKKAILNKVIHSEQWEKFL
GRKYVGTKRFGLDGGESMIPALEAVIKYSGAYGVNEVVIGMAHRGRLNVLSNVMEKPYRA
IFNEFAGGSSNPEDVGGSGDVKYHLGTSTDREFDGNKVHLSLAPNPSHLECVNPVVLGKS
RAKQTKLDDLERSKVLPILLHGDAAFAGQGIIMECFGFSGLRGYNTGGTIHFVINNQVGF
TTSPQFARSSPYPSDIAKMVQAPILHVNGDDPEAVTFACKVATEFRQTFKRDVVIDMWCY
RRFGHNEGDEPGFTQPLMYEAIRKHPPVSAIYSARLVQEGVIDAEWTGKAEAEFVAHLET
EFEAGKGYKVNKADWFEGDWTGFAEPREAITERRAAVTGISAELFEDLGRQLTTVPEGLS
IHKTLNRILDAKKEMFASGAGFDWATAEALAFGSLLRDGYGVRLSGQDSGRGTFSQRHAV
WVDQKDGHKYIPLSAMDRRFQVLDSPLSEFGVLGFEYGYASAAPNTLVMWEAQFGDFANG
AQVIIDQFISSGEAKWLRVNGLVMLLPHGYEGQGPEHSSARLERYLQLCAEDNMQVANCT
TPANYYHILRRQMVRQFRKPLIIMTPKSLLRHKSAVSTTEEMLGESRFQRVLPDHNPPED
KDVRRVVLVSGKLFYELAEARDAAGDANTTILRLEQLYPFPADALITRLGRMPNLETVVW
AQEEPKNQGAWTFVEPYIEKVLTDVGGTPRRAVYAGRKAAAATATGLARNHAVQQAALIA
DALGHEAKGK
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcgaaggcgtcgagttcgacggaccggagggagttagcgcttccttcgttgaa
tcgctttatcgtcaatatcgctcggacaagtcgagcgtggagccgagctggcaggactat
ttcgccggcatcgaggcgggggtttcgggaccgagctgggcccgcaccaactggccgccg
accagcaccgacgcgctgaccgcggcgctcgatcccacccagatggaggtgcccgccaag
ccggccaaggccggtggggcacccgcgccggccgtttcggcgccggctgccggcgcgacg
ccggccgaggtggagcagcgcgcgctcgactcgatccgcgcgatcatgctgatccgcacc
tatcgggtgcgcggccacctgctcgccaatctcgatccgctcggcctgtcgcagcgcgag
gagacggaggacctgaccccggcctggcacggcttcaccgaggccgacatggaccggcag
gtctacatcgccggcttcctgggcctcgactgggcgaccccgcgcgagatcctcgccatc
ctccgcaggaactactgcggcaatgtcggcgtcgaatatatgcacatcggcgacgtggag
gagcggcgcttcctccaggcgcggatggaaggcaaggatgccgagatcagcttcacgccc
gagggcaagaaggcgatcctcaacaaggtgatccactccgagcagtgggagaagttcctg
ggccgcaaatatgtcggcaccaagcgcttcggcctcgacggcggcgaatcgatgatcccc
gcgctcgaggcggtgatcaaatattccggcgcctatggcgtgaacgaggtcgtgatcggc
atggcccatcgcggccgcctcaacgtcctctccaacgtcatggagaagccctaccgcgcg
atcttcaacgagttcgcgggcggctcctccaatccggaggatgtcggcggatcgggcgac
gtcaaatatcacctcggcacctcgaccgaccgtgagttcgacggcaacaaggtccacctg
agcctcgcgccgaacccgtcgcacctcgaatgcgtcaacccggtggtgctcggcaagtcg
cgcgccaagcagaccaagctcgacgacctcgaacggtcgaaggtgctgccgatcctgctg
cacggcgacgccgccttcgcgggccagggcatcatcatggagtgcttcggcttctccggc
ctgcgcggctacaacaccggcggcacgatccatttcgtgatcaacaaccaggtgggcttc
accacctcgccgcagttcgcgcgctcctcgccctatccgtcggacatcgcgaagatggtg
caggcgccgatcctgcacgtgaacggcgacgatcccgaggccgtcaccttcgcctgcaag
gtggcgaccgagttccgccagaccttcaagcgcgacgtcgtgatcgacatgtggtgctat
cgccgcttcggccataacgaaggcgacgagccgggcttcacccagccgctgatgtacgag
gcgatccgcaagcatccgccggtcagcgcgatctacagcgcgcgtctggtgcaggaaggc
gtcatcgacgccgaatggaccggcaaggccgaggccgagttcgtcgcccatctcgaaacc
gagttcgaggcgggcaagggctacaaggtcaacaaggccgactggttcgaaggcgactgg
accggcttcgccgagccgcgcgaggcgatcaccgagcgccgcgccgccgtcaccggcatc
tcggccgagctgttcgaggatctcggccggcagctcacgaccgtccccgaggggctgtcg
atccacaagacgctcaaccgcatcctcgacgcgaagaaggagatgttcgcgtcgggcgcc
ggcttcgactgggcgaccgccgaggcgctcgccttcggctcgctgctgcgcgacggctat
ggcgtccgcctgtcgggccaggattcgggccgcggcaccttcagccagcggcacgccgtc
tgggtcgaccagaaggacggccacaagtacatcccgctctcggcgatggaccggcgcttc
caggtgctcgacagcccgctgtccgaattcggcgtgctcggcttcgaatatggctatgcg
tcggcggcgccgaacacgcttgtcatgtgggaagcccagttcggcgacttcgccaacggc
gcgcaggtcatcatcgaccagttcatctcgtcgggcgaggcgaagtggctgcgcgtcaac
ggcctcgtgatgctgctgccgcacggctatgaagggcagggacccgagcacagctcggcc
cggctggagcgctatctgcagctctgcgccgaggacaatatgcaggtcgccaactgcacg
acgccggccaattattaccacatcctgcgccggcagatggtccgccagttccgcaagccg
ctgatcatcatgacgccgaagtcgctgctccgtcacaagtcggcggtgtcgacgaccgag
gagatgctgggcgaaagccggttccagcgcgtccttcccgaccacaatccgccggaggac
aaggacgtccgccgggtggtgctggtctcgggcaagctcttctacgagctggccgaggcg
cgcgacgcggccggggacgccaacacgacgatcctgcggctcgagcagctctatcccttc
ccggccgatgcgctgatcacgcgcctgggccggatgcccaacctcgaaaccgtggtctgg
gcgcaggaggagccgaagaaccagggcgcctggaccttcgtcgagccctatatcgagaag
gtcctgaccgacgtgggcggcacgccgcgccgcgccgtctatgccggccgcaaggccgcc
gccgcgacggccaccggcctcgcccgtaaccacgccgtccagcaggcggcactgattgcc
gacgcgctcggccacgaagcgaagggtaagtaa
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