Rhizorhabdus wittichii RW1: Swit_3943
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Entry
Swit_3943 CDS
T00538
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi00470
D-Amino acid metabolism
swi00550
Peptidoglycan biosynthesis
swi01100
Metabolic pathways
swi01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Swit_3943
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Swit_3943
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Swit_3943
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
swi01011
]
Swit_3943
Enzymes [BR:
swi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Swit_3943
Peptidoglycan biosynthesis and degradation proteins [BR:
swi01011
]
Precursor biosynthesis
Amino acid ligase
Swit_3943
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
ABQ70288
UniProt:
A5VDC2
LinkDB
All DBs
Position
complement(4329234..4330172)
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AA seq
312 aa
AA seq
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MTHPLHIAVLMGGWSSEREVSLTSGNGVADALESLGHKVTRIDMDRDVALRLAEAKPDVV
FNALHGTPGEDGTVQGMMDLMGLTYTHSGLTTSVIAIDKELTKQQLVPHGIRMPEGIIVE
SESLHAGDPMPRPYVLKPVNEGSSVGVAIIKERDNHGVPIHRDSHGPWQTFATLLAEPFI
RGRELTVAVLGNRALGVTELVPSSGFYDYEAKYTDGLTTHICPADVPADIAEAAMRMALD
AHRLLGCKGTSRSDFRWDDERGEAGLYLLEVNTQPGMTPLSLVPEQARHVGLTYADLVQA
IVDEALAGKAAR
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgacccatcccctccacatcgcggtgctgatgggcggctggtcgtcggagcgcgaggtg
tcgctgacctcgggcaacggcgtcgccgacgcgctcgagagcctgggtcacaaggtgacg
cggatcgacatggaccgcgacgtcgcgctgcgcctggccgaggcgaagcccgacgtggtg
ttcaacgcgctgcacgggacgccgggcgaggacggcaccgtccagggcatgatggacctg
atggggctgacctacacccattcggggctgaccacctcggtcatcgcgatcgacaaggag
ctgaccaagcagcagctcgtcccccacggcatccgcatgcccgagggcatcatcgtcgag
agcgagagcctccatgccggcgacccgatgccgcgcccctatgtgctcaagcccgtcaac
gagggatcgtcggtcggcgtcgcgatcataaaagaacgtgacaatcacggcgtgccgatt
catcgtgactcgcatggcccgtggcagaccttcgcgaccctgctggcagaacccttcatc
cgggggcgcgagctgaccgtcgcggtgctcggcaatcgcgccctgggcgtgaccgagctg
gtccccagcagcggcttctatgactatgaagccaaatataccgacgggctgaccacccat
atctgccccgccgacgtccccgccgacatcgccgaggcggcgatgcggatggcgctcgac
gcgcaccggctgctcggctgcaagggcacgtcgcgctccgacttccgctgggacgacgaa
cggggcgaggccgggctctacctgctcgaggtcaacacccagccgggcatgaccccgctg
agcctggtccccgaacaggcgcgccatgtcggcttgacctatgccgacctggtccaggcg
atcgtcgacgaggcgctggccgggaaggccgcgcgatga
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