Streptomyces xiamenensis: SXIM_20570
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Entry
SXIM_20570 CDS
T03904
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sxi
Streptomyces xiamenensis
Brite
KEGG Orthology (KO) [BR:
sxi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sxi03016
]
SXIM_20570
Enzymes [BR:
sxi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SXIM_20570
Transfer RNA biogenesis [BR:
sxi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SXIM_20570
Prokaryotic type
SXIM_20570
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AKG43441
UniProt:
A0A0F7CNS9
LinkDB
All DBs
Position
complement(2233126..2233995)
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AA seq
289 aa
AA seq
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MGRAEERKKRVSETVRVRLDVSYDGAAFSGWARQRGRRTVQEELEEALRVVTRSARGYEL
TVAGRTDAGVHARGQVAHVDLPAEVWEEQRENLHRRLTGRLPQDVRVRRVSRAPADFDAR
FSAIWRRYVYRVSDHPGGVDPLRRGHVLWHNWPLDVAAMNAASQRLLGEHDFAAYCKRRE
GATTIRTLRRLSWERGADGVLEGTVEADAFCHNMVRSLVGALLFVGDGHRDPDWPGKVLA
AGVRDSAVHVVRPHGLTLEEVGYPADELLAARSREARNVRTLPASAGCC
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtggggcgtgcggaggagaggaagaagcgggtgtccgagacggttcgggtacgtcttgac
gtgtcctacgacggcgcggcgttctccggctgggcgcgccagcgggggcggcgcaccgtg
caggaggagctggaggaggcgctgcgggtcgtcacccgctcggcgcgggggtacgagctg
acggtggccggccgaaccgacgccggggtgcacgcgcgcggccaggtggcccacgtggac
ctgccggcggaggtgtgggaggagcagcgggagaacctgcaccgccgcctgaccggccgg
ctgccgcaggacgtacgggtgcgccgggtctcccgcgccccggcggatttcgacgcgcgc
ttctcggcgatctggcgccggtacgtctaccgggtgagcgaccatccgggcggggtggac
ccgctgcggcgcggccatgtgctgtggcacaactggccgctggacgtggcggcgatgaac
gcggcctcccagcggctgctgggcgaacacgacttcgcggcgtactgcaagcggcgcgag
ggcgcgacgacgatccgtacgctgcgccggctcagctgggagcggggcgcggacggggtg
ctggagggcaccgtggaggcggacgcgttctgccacaacatggtgcgctcgctggtgggg
gcgctgctgttcgtgggggacgggcaccgggaccccgactggccggggaaggtgctggcg
gccggggtgcgcgactcggcggtgcacgtggtgcgcccgcacgggctgaccctggaggag
gtcggctacccggcggacgagctgctggcggcccgcagccgggaggcgcgcaacgtccgc
accctcccggcgtcggcgggctgctgctag
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