Streptomyces xiamenensis: SXIM_42820
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Entry
SXIM_42820 CDS
T03904
Name
(GenBank) cyclodehydratase
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
sxi
Streptomyces xiamenensis
Brite
KEGG Orthology (KO) [BR:
sxi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sxi03009
]
SXIM_42820
Ribosome biogenesis [BR:
sxi03009
]
Prokaryotic type
ribosomal protein modification factors
SXIM_42820
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Gene cluster
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
AKG45666
UniProt:
A0A0F7CQ24
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Position
4571479..4573347
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AA seq
622 aa
AA seq
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MRLPTATATPLEAARAQLATALGTPVVPLGAGDALQTAGPDPYAAERPAATVHLSSRAVL
LGPWGHPGAGGGCGHCLAIRWQRLRSRSEREALELGFDPDGATAWPVLTDYALDAVRAAR
AALAPRPLPPGEPARVTRIDLNTLALATFPLLPEPLCPHCVRPAPASAERARMRLTPSPR
TAGHRTRPLASFPLPENALANPVCGALGSRTELNPVSTTTAPVSGSHFVRGYAGLNDVTW
SGQASRYETSRRLAFLEGLERYAGTHARRGLQPVRGSYHDLLRAHGERQVLHPADCGLYA
EATYREDPLLSPFDPDREIPWLWGHSLGQDHPVLVPARLAHYGAGERADNFVFECSNGCA
TGGTLTEAILFGLLELIERDAFLVAWYGRTRPARIDLDSCRDPAIRTALDRAELLGYEVR
AFDTRADLPVPVITGLAVRRDGGPGYLSFGAAAALDAESAVDSALSEVLTYIPHLPYQVG
ERLAELRAMARDHTRVEHLKDHAQLYGLPEMAEHAQHFLAPAAAVPLADAFADWEAVRPR
TGDLLDDLHALRDALATAGHDVIAVDQTTPEQAAIGLHTVATLVPGLLPLDFGHRRQRAP
LMPRLHRLAGTTDLNPAPHPFP
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctccccaccgccaccgccacccctctggaagcggcccgcgcccagttggccact
gccctgggcacccccgtggtcccgctgggcgccggcgacgccctccagaccgccgggccc
gacccgtacgccgccgagcggcccgccgccaccgtgcacctcagctcccgcgccgtcctg
ctcgggccgtgggggcacccgggtgcgggcggcggctgcggccactgcctggccatccgc
tggcagcggctgcgttcccgctccgaacgggaggcgctggagctgggcttcgaccccgac
ggggccaccgcctggccggtgctcaccgattacgcgctggacgcggtgcgggccgcccgc
gcggcgctcgcgccccgcccactgccgcccggcgaacccgcccgcgtcacccggatcgac
ctgaacaccctggcgctggccaccttcccgctgctgccggaaccgctgtgcccgcactgc
gtacggccggcccccgcctccgccgagcgcgcccggatgcggctgaccccctcaccccgg
acggccggacaccgcacccgtccgctggcctcgttcccgctgcccgagaacgccctcgcc
aacccggtgtgcggcgcgctcggctcgcgcaccgaactcaaccccgtctccaccaccacc
gcccccgtctccggcagccacttcgtgcgcgggtacgccggtctcaacgacgtcacctgg
agcggtcaggcctcgcgctacgagaccagccgccggctcgccttcctggagggcctggaa
cggtacgccggcacccacgcgcggcgcggcctccagccggtgcgcggctcgtaccacgac
ctgctgcgcgcccacggggagcgccaggtcctgcacccggcggactgcggcctgtacgcc
gaggccacctaccgcgaggacccgctgctctccccgttcgacccggaccgtgaaatcccc
tggctgtgggggcactcgctgggccaggaccacccggtcctggtgccggccagactggcg
cactacggcgcgggggagcgggccgacaacttcgtcttcgagtgctccaacggctgcgcc
accggcggcaccctgaccgaggcgatcctgttcgggctgctggaactgatcgaacgcgac
gcgttcctggtcgcctggtacgggcggacccgcccggcccgcatcgacctggacagctgc
cgcgacccggccatccgcaccgccctggaccgggcggaactgctcggctacgaggtgcgg
gccttcgacacccgcgccgacctgccagtaccggttatcacaggtctcgcggtacggcgc
gacggcggccccggatatctctccttcggcgcggcggcggccctggacgcggagtcggcc
gtggacagcgcgctctccgaggtcctcacctatatcccgcacctgccctaccaggtgggg
gagcggctggcggaactgcgggcgatggcgcgggaccacacccgggtcgagcatctgaag
gaccacgcccagctgtacggcctgccggagatggccgagcacgcccagcacttcctcgcc
cccgcggcggccgtccccctggcggacgccttcgccgactgggaggcggtacggccgcgc
accggtgacctgctggacgatctgcacgcgctgcgcgacgcgctggccaccgcaggacac
gacgtgatcgccgtcgaccagaccaccccggaacaggcggcgatcggcctgcacaccgtc
gccaccctcgtcccgggactgctcccgctggacttcggccaccggcgccagcgcgccccg
ctcatgcccagactccaccgactggcgggcacgacggacctcaacccggccccgcacccc
ttcccttag
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