Shewanella xiamenensis: MKD32_08875
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Entry
MKD32_08875 CDS
T08228
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
sxm
Shewanella xiamenensis
Pathway
sxm00020
Citrate cycle (TCA cycle)
sxm00480
Glutathione metabolism
sxm01100
Metabolic pathways
sxm01110
Biosynthesis of secondary metabolites
sxm01120
Microbial metabolism in diverse environments
sxm01200
Carbon metabolism
sxm01210
2-Oxocarboxylic acid metabolism
sxm01230
Biosynthesis of amino acids
Module
sxm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sxm_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
MKD32_08875
09106 Metabolism of other amino acids
00480 Glutathione metabolism
MKD32_08875
Enzymes [BR:
sxm01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
MKD32_08875
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GFIT
Motif
Pfam:
IDH
Peptidase_C53
RodZ_C
Motif
Other DBs
NCBI-ProteinID:
UML95382
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Position
1998402..2000627
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AA seq
741 aa
AA seq
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MKDNSPTIIYTETDEAPALATLSLLPIIKTFTNAAGVAVETRDISLSGRVIANFPEKLTD
AQKIGDHLAELGDLANKPEANIIKLPNISASIPQLKACILELQQKGYDIPNYPDEPKTDE
EKSIKARYDKIKGSAVNPVLREGNSDRRAPLSVKNFAKKNPHSMGKWVKDSKSHVAHMSE
GDFYGSEQSVTLANADTVNIVLAQKDGQEVVLKSGLKLLAGEIIDASVMSKKALVSFFER
EIANAKAENVLLSLHLKATMMKVSDPIMFGHAVKVFFKPVFDKHAALFAELGVDVNNGFG
DVYAKIASLPADVRSQIEADIAAVYAERPALAMVDSDKGITNLHVPSDIIIDASMPAAIR
SSGQMWGPDGKLHDTKALIPDRCYAGVYQETIAFCKEHGAFDPSTMGSVPNVGLMAQKAE
EYGSHDKTFEIPADGVVNVIDASGKVLMSHNVEAGDIWRMCQVKDAPIRDWVKLAVRRAR
LSNTPAVFWLDANRAHDAQLIAKVKQYLPEHDTNGLEISIMSPEEATRFSLVRIKEGKDT
ISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQVEKEGH
LRWDSLGEFLALAASLEHLSQTVGNPKAQVLADTLDQAIGQFLDSNKSPSRRVGELDNRG
SHFYLAMYWAQALAAQTKDEQLQAHFIPLAHALSANEQVIVAELNNAQGAPVDLGGYYRL
DAAKAEKAMRPSETLNKLLLA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataactcaccaacaattatttataccgaaaccgatgaagcgccagcactggca
acgctttctctgttacctatcatcaagacctttaccaatgcggcgggtgtggcggttgaa
acccgtgacatttctttatcaggccgtgtgattgctaacttcccagaaaaactgactgac
gcccaaaagattggcgatcacttagctgagcttggcgatttagcgaataaaccagaagct
aatatcatcaagctgcctaatatcagtgcgtcaatcccacagttaaaagcctgtatttta
gagctgcaacagaaaggttatgacattccaaactatcctgacgagccaaaaactgacgaa
gaaaagtcaattaaagcgcgttatgacaagatcaagggcagtgcggtaaaccccgtcctg
cgtgaaggtaactctgatcgccgcgcgccgctgtcagtgaaaaacttcgctaaaaagaac
ccacactctatgggtaaatgggtgaaagactctaagtcacacgttgctcatatgagcgaa
ggtgatttttacggtagcgagcagtcagtgactttggctaacgcagacacggttaacatc
gttctggcacaaaaagacggtcaagaagtcgtccttaaatcaggtctgaaactgctcgcg
ggtgaaatcatcgacgcgtcagtgatgagcaaaaaagccttagtcagcttctttgagcgt
gaaattgccaatgccaaggctgaaaacgtactgttatcgctgcaccttaaagccaccatg
atgaaagtgtccgatcccatcatgtttggccatgcagtgaaagtgttcttcaaaccggta
tttgataaacatgcagcgttatttgctgaattaggcgttgatgtgaacaacggttttggc
gacgtatatgcgaaaatcgccagcttacctgccgatgtacgcagccaaattgaagccgat
atcgcggcggtctacgctgagcgtcctgcgctggcgatggtggattctgacaaaggcatc
accaacttacacgtccctagcgacatcattatcgatgcttctatgccagctgccattcgt
tcatcaggccaaatgtggggtcctgatggcaagttgcacgacactaaagccctgatccca
gaccgttgctacgcgggtgtgtatcaagaaactatcgctttctgtaaagaacacggtgcc
ttcgatccaagcactatgggtagcgtgccaaacgttggtctgatggcgcaaaaagccgaa
gaatacggtagccatgataaaaccttcgaaatcccagccgatggcgtagttaacgtgatt
gatgccagtggcaaagtgttaatgagccacaacgtcgaagcgggtgatatttggagaatg
tgccaagttaaagatgccccaattcgcgactgggtgaaattagccgtacgccgtgcacgc
ttaagcaatactccagcagtattctggttagatgcaaatcgtgcccacgatgcacagctg
atcgctaaagtgaagcaatatctgcctgagcatgatactaacggtttagaaatcagcatc
atgtcaccagaagaagcgactcgtttctcattagtacgtattaaagaaggtaaagatact
atttctgttaccggtaacgtactgcgtgactacctgactgacttgttcccaatcctcgaa
ttgggtaccagtgctaagatgctgtctatcgtgccattaatgaatggtggcggcctgttc
gaaacgggggcgggcggtagtgcgcctaaacacgtacaacaggttgaaaaagaaggtcac
ttacgttgggactctctgggcgaattcctagcattagcggcttctttagagcatttaagc
caaactgtggggaaccctaaagcgcaggtactggcggataccttagatcaagccatcggt
cagttcttagatagcaacaagtcgccatcaagacgcgttggagagctggataaccgtggt
agccatttctatctggccatgtactgggcacaggcattagccgctcaaaccaaagacgag
cagttacaagctcactttattccattagcgcacgctttaagcgccaatgagcaagtgatt
gtggctgaactcaacaatgcgcaaggtgcaccagtggatttaggcggttactatcgttta
gacgccgcaaaagctgaaaaagccatgcgcccaagcgagacactgaacaagctattactt
gcttaa
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