Streptomyces yangpuensis: NRK68_24515
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Entry
NRK68_24515 CDS
T08585
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
syan
Streptomyces yangpuensis
Pathway
syan03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
syan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NRK68_24515 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syan03400
]
NRK68_24515 (mutM)
Enzymes [BR:
syan01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NRK68_24515 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NRK68_24515 (mutM)
DNA repair and recombination proteins [BR:
syan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NRK68_24515 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DZR
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
UUY50111
LinkDB
All DBs
Position
5318616..5319485
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AA seq
289 aa
AA seq
DB search
MPELPEVEVVRRGLERWVAGRTVEAVEVLHPRAVRRHPGGGADFAARLRGEVLGVPQRRG
KYLWLPLAGRDLSVLGHLGMSGQLLVQPEGAVDEKHLRIRVRFGDDAGTELRFVDQRTFG
GLSLHETVADSAEGLPDVIAHIARDPLDPLFDETAYHLALRAKRTTVKRALLDQSLISGV
GNIYADEALWRARLHYERPTANLTRPRSAELLGHVRDVMNAALAVGGTSFDSLYVNVNGE
SGYFDRSLDAYGREDEPCRRCGTPMRRRPWMNRSSYFCPRCQRPPRVSS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctgcccgaagtcgaagtcgtacggcgggggctggagcgctgggtggccgga
cggaccgtcgaggccgtcgaggtcctgcacccgcgtgcggtgcggcgccatccgggcggc
ggggccgacttcgcggcgcggctgcggggcgaggtcctcggggtgccgcagcgccgcggg
aagtacctgtggctgcccctggcggggcgggacctgtcggtgctcgggcacctgggcatg
agcgggcaactgctcgtgcagcccgagggcgccgtcgacgagaagcacctgcggatccgg
gtgcgcttcggggacgacgccgggacggagctgcgcttcgtggaccagcggaccttcggc
gggctctcgctgcacgagaccgtcgccgacagcgccgagggcctgcccgacgtcatcgcg
cacatcgcgcgcgaccccctggatccgctgttcgacgagacggcctaccacctggcgctg
cgcgccaagcggaccaccgtcaagcgggccctgctcgaccagtccctgatcagcggggtc
ggcaacatctacgccgacgaggcgctgtggcgcgccaggctgcactacgagcgccccacg
gccaacctcacgcgcccccggagcgcggaactcctcggccatgtccgggacgtcatgaac
gcggccctcgccgtgggcgggacgagcttcgacagcctgtacgtcaacgtgaacggggag
tcgggctacttcgatcggtcactcgacgcctacgggcgcgaggacgagccctgccggcgc
tgcggcacgccgatgcgccgccggccgtggatgaacaggtcgagctacttctgcccgcgc
tgtcagcggccgccgcgcgtttcgtcgtag
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