Sediminicola sp. YIK13: SB49_00775
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Entry
SB49_00775 CDS
T04145
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
syi
Sediminicola sp. YIK13
Pathway
syi00470
D-Amino acid metabolism
syi00550
Peptidoglycan biosynthesis
syi01100
Metabolic pathways
syi01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SB49_00775
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SB49_00775
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SB49_00775
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
syi01011
]
SB49_00775
Enzymes [BR:
syi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SB49_00775
Peptidoglycan biosynthesis and degradation proteins [BR:
syi01011
]
Precursor biosynthesis
Amino acid ligase
SB49_00775
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
CPSase_L_D2
ATP-grasp
ATP-grasp_4
GARS_A
Motif
Other DBs
NCBI-ProteinID:
ALM06508
UniProt:
A0A0S1S7B8
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All DBs
Position
complement(162166..163146)
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AA seq
326 aa
AA seq
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MKKNIAIIMGGYSSEYKISLKSGGVVLKYLDKEKYNVFPVHIYKEKWVHVDAELNEHPIN
RFDFSLDMPNGKIVFDCVFNAIHGTPGEDGLMQGYFKLMGIPQTSCDYYQAALTFNKRDL
LSVLKPYGIVSATSYYLNLGDPINEEEIVKKVGLPCFVKANKAGSSFGISKVYQKEDLSE
AILKAYKEDDEIIIESFLNGTEVSVGVITYNGATKVLPITEIVTENDFFDYEAKYEGKSK
EITPARITKEQELMVSEAAKRAYEVLKMKGFSRSEFIFVGDQPFMLEMNTTPGLTEESIL
PQQAKAAGIELPQLFESAIKEALKEK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaacattgccatcatcatgggcgggtattccagcgaatataagatttcacta
aaaagtggaggggtagtacttaaatatttggataaggagaaatacaatgtctttcctgtc
catatttataaggaaaaatgggttcatgttgatgcagaactaaacgagcatcccataaat
aggtttgatttttctttggacatgcccaatggaaaaatagtttttgattgcgtctttaat
gccatccatggcaccccaggggaagatggtttgatgcagggatattttaaattgatgggc
attccccaaacttcatgtgattattaccaagcggccttgacctttaacaaaagggatctc
ttgagtgtgcttaaaccatatggtattgtatctgccacttcctattatttaaatttagga
gatcctatcaatgaagaggagattgtcaaaaaagtaggtcttccctgttttgttaaggca
aataaagccggcagcagctttggcatctccaaagtctaccaaaaagaagatctttctgag
gcaattttaaaggcctataaagaagatgacgaaataattattgaaagttttttaaatggt
acagaagtctctgtaggggtcatcacttataatggagcgaccaaggtattgcccattacc
gaaatagtcaccgagaacgacttttttgattatgaggccaaatacgaaggaaaatctaaa
gaaataacccctgccagaataaccaaggagcaggaattgatggtatctgaagctgcaaaa
cgcgcctatgaagtactaaaaatgaagggcttctctagaagtgagttcatttttgtaggg
gaccaaccctttatgttagagatgaatacaacaccaggtctcaccgaagaaagcatttta
ccccaacaggccaaggcggctggcattgaactaccacagctttttgaaagtgccatcaag
gaagccttaaaagaaaaataa
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