KEGG   Sediminicola sp. YIK13: SB49_00775
Entry
SB49_00775        CDS       T04145                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
syi  Sediminicola sp. YIK13
Pathway
syi00470  D-Amino acid metabolism
syi00550  Peptidoglycan biosynthesis
syi01100  Metabolic pathways
syi01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:syi00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SB49_00775
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    SB49_00775
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    SB49_00775
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:syi01011]
    SB49_00775
Enzymes [BR:syi01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     SB49_00775
Peptidoglycan biosynthesis and degradation proteins [BR:syi01011]
 Precursor biosynthesis
  Amino acid ligase
   SB49_00775
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_3 CPSase_L_D2 ATP-grasp ATP-grasp_4 GARS_A
Other DBs
NCBI-ProteinID: ALM06508
UniProt: A0A0S1S7B8
LinkDB
Position
complement(162166..163146)
AA seq 326 aa
MKKNIAIIMGGYSSEYKISLKSGGVVLKYLDKEKYNVFPVHIYKEKWVHVDAELNEHPIN
RFDFSLDMPNGKIVFDCVFNAIHGTPGEDGLMQGYFKLMGIPQTSCDYYQAALTFNKRDL
LSVLKPYGIVSATSYYLNLGDPINEEEIVKKVGLPCFVKANKAGSSFGISKVYQKEDLSE
AILKAYKEDDEIIIESFLNGTEVSVGVITYNGATKVLPITEIVTENDFFDYEAKYEGKSK
EITPARITKEQELMVSEAAKRAYEVLKMKGFSRSEFIFVGDQPFMLEMNTTPGLTEESIL
PQQAKAAGIELPQLFESAIKEALKEK
NT seq 981 nt   +upstreamnt  +downstreamnt
atgaaaaagaacattgccatcatcatgggcgggtattccagcgaatataagatttcacta
aaaagtggaggggtagtacttaaatatttggataaggagaaatacaatgtctttcctgtc
catatttataaggaaaaatgggttcatgttgatgcagaactaaacgagcatcccataaat
aggtttgatttttctttggacatgcccaatggaaaaatagtttttgattgcgtctttaat
gccatccatggcaccccaggggaagatggtttgatgcagggatattttaaattgatgggc
attccccaaacttcatgtgattattaccaagcggccttgacctttaacaaaagggatctc
ttgagtgtgcttaaaccatatggtattgtatctgccacttcctattatttaaatttagga
gatcctatcaatgaagaggagattgtcaaaaaagtaggtcttccctgttttgttaaggca
aataaagccggcagcagctttggcatctccaaagtctaccaaaaagaagatctttctgag
gcaattttaaaggcctataaagaagatgacgaaataattattgaaagttttttaaatggt
acagaagtctctgtaggggtcatcacttataatggagcgaccaaggtattgcccattacc
gaaatagtcaccgagaacgacttttttgattatgaggccaaatacgaaggaaaatctaaa
gaaataacccctgccagaataaccaaggagcaggaattgatggtatctgaagctgcaaaa
cgcgcctatgaagtactaaaaatgaagggcttctctagaagtgagttcatttttgtaggg
gaccaaccctttatgttagagatgaatacaacaccaggtctcaccgaagaaagcatttta
ccccaacaggccaaggcggctggcattgaactaccacagctttttgaaagtgccatcaag
gaagccttaaaagaaaaataa

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