Sediminicola sp. YIK13: SB49_06605
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Entry
SB49_06605 CDS
T04145
Name
(GenBank) DNA recombination protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
syi
Sediminicola sp. YIK13
Pathway
syi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SB49_06605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syi03400
]
SB49_06605
DNA repair and recombination proteins [BR:
syi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SB49_06605
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
AAA_29
AAA_27
MukB
ATPase_2
nSTAND3
SbcC_Walker_B
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ALM07510
UniProt:
A0A0S1SAN3
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Position
1496517..1497596
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AA seq
359 aa
AA seq
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MFLKKLALINYKNFSSQNFEFDHKINCFVGPNGIGKTNILDAIYHLSFSKSYFNPVATQN
IKHGEDFFVIDGEYEKNGREEKIICSLKKGMKKVVKRNGKAYDKLSDHIGFLPLVIISPA
DRDLIIEGSDTRRKFMDGVISQSDKSYLSSLMNYNKVLAQRNSLLKYFAANHTFDRTTLA
VYNEQLDRYGTEIHNKRMSFLEAFIPIFKEQYEVISGAKEEVHINYDSKLLDDGLLNLLE
GSLDKDRALQYTSVGVHKDDLNFEIEGFPIKKFGSQGQQKSFLIALKLAQFNFIKTQAKT
TPILLLDDIFDKLDENRVAHIVSLVDDDYFGQIFISDTHADRTEEVVKTIHKSYKIFKL
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgaaaaaattagcccttattaattacaagaatttcagctcccaaaacttcgaa
tttgatcataagataaattgttttgtagggcccaatggaattggcaaaaccaatattttg
gatgctatctatcacctatccttcagcaagagctactttaatccggtggccacccaaaat
ataaaacatggggaagatttttttgtcattgacggagaatacgaaaagaacggcagagag
gaaaaaatcatctgcagcctcaaaaagggcatgaaaaaggttgtgaaacgaaatgggaaa
gcctacgataaactttctgaccatattggatttctacctttggtcattatttcgccggca
gatcgtgatctgataatcgaaggcagtgatacccgaagaaagtttatggatggggtaatt
tcacaatcggataagtcctacctatcctcccttatgaattacaataaggtattggcacag
cgaaattccctattaaaatactttgccgccaaccatacttttgaccgcactacccttgct
gtatacaatgaacagttggacaggtacggtactgaaatccacaacaaaaggatgtctttc
ctagaagcattcattcctattttcaaagaacaatacgaagtgatctctggagccaaggaa
gaggtacatattaattacgacagtaaattattggatgatggtctccttaatttattggaa
ggcagcctagataaggacagggccttgcaatatacatccgttggggtccacaaggacgac
ctcaactttgaaattgaaggatttcccattaaaaaatttggttcccagggacagcagaaa
tcttttctgatcgcattgaaattggcccagttcaattttataaaaacccaggcaaaaaca
accccgatcttacttttggatgatatttttgacaaactggacgaaaatagggtagcacat
attgtttccttggtagatgatgattattttggtcaaatatttatcagcgacacccacgcc
gaccgcacggaagaagttgtaaaaaccattcataagtcgtataaaatttttaaattatag
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