Sediminicola sp. YIK13: SB49_14465
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Entry
SB49_14465 CDS
T04145
Name
(GenBank) 2-oxoglutarate dehydrogenase
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
syi
Sediminicola sp. YIK13
Pathway
syi00020
Citrate cycle (TCA cycle)
syi00785
Lipoic acid metabolism
syi01100
Metabolic pathways
syi01110
Biosynthesis of secondary metabolites
syi01120
Microbial metabolism in diverse environments
syi01200
Carbon metabolism
syi01210
2-Oxocarboxylic acid metabolism
Module
syi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
syi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SB49_14465
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SB49_14465
Enzymes [BR:
syi01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
SB49_14465
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Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
ALM08862
UniProt:
A0A0S1SEY2
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Position
3246114..3248915
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AA seq
933 aa
AA seq
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MDKYSFLNAAHTSFFAELYDKYLTNPDSVEPSWRAFFQGFDFGQESAWDEMEMPASSAGA
AMPQGQQVEIPQTLQKEFQVVKLIDGYRSRGHLFTKTNPVRERRKYTPTLDIENFGLEPG
DMDTVFTAGQIIGIGKSTLREIIDHLKSIYCDAIGVEYMYIRTPERIEWIQNRLNINDNH
PKYSNDRKKHLLKKLNEAVSFESFLHTKYVGQKRFSLEGNESLIPALDAVVERAAEMGVE
QFVMGMAHRGRLSVLTNIFGKSPKDIFGEFDGKDYEQDIFDGDVKYHLGWTSDRMSDNGN
KIKMNIAPNPSHLETVGAVVEGITRAKQDEYYPDDFSKVLPIIVHGDAAIAGQGLVYEVV
QMADLDGYRTNGTIHIVVNNQIGFTTNYLDARTSTYCTDVAKVTLSPVLHVNADDPEAVV
HASMFALEYRMTFKRDVFLDLLGYRKYGHNEGDEPRFTQPKLYKAIASHQNARDLYAAKL
IAEGVIDESFVPKLEEEYKASLEEDLEDSRKLDKTVITPFMADEWSGFEAVQEEEMMKPV
DTTFDKKKLTEIAKIITELPKGKKFLRKVVKLIDDRKKMFFETDTLDWAMGELLAYGTLL
HEGYGVRMSGQDVERGTFSHRHAVVKVEESEEEIMQLNMLSEDQGRFQIYNSLLSEYGVV
GFDYGYAMASPNTLTIWEAQFGDFSNGAQIMIDQYISAAEDKWKLQNGLVMLLPHGYEGQ
GAEHSSARMERYLQLCAKDNMYIADCTTPANMFHLLRRQMKSNFRKPLIVFTPKSLLRHP
KAVSSADEMANGKFQEVIDDVSADDKKIKSLVFCTGKFYYDLLAVKEENNRDDVALVRVE
QLFPLPAAQMKDIIAKYKNADDIVWAQEEPRNMGAWSHLLMHFSDVSKFRVASRRFYASP
AAGSAVRSKRRHQEVITYVFDKTKDNMVRENIK
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggataaatattcttttttaaatgctgcgcatacttcctttttcgcagaactatatgac
aagtatttaacgaatcccgatagcgttgagccaagttggcgtgcgtttttccaaggtttt
gactttggtcaggagagtgcctgggatgaaatggaaatgccagcttcatctgctggtgcc
gccatgccccaagggcagcaagtggaaattccgcaaactcttcagaaggaatttcaagtc
gtaaaacttattgatgggtaccgcagtagagggcacctgtttacaaaaaccaatcctgtt
agggaaagacgaaagtataccccaaccttggacatagaaaactttggcctggaaccaggg
gatatggatacggtttttacggcgggtcaaatcattggaataggtaagagtaccttgagg
gagatcattgaccacttaaagagtatctattgtgacgccattggggtggagtacatgtac
atcagaacccctgagcgtattgaatggattcaaaatagattgaacataaacgacaaccat
cctaagtacagtaacgaccgtaaaaagcatcttctaaaaaagttgaatgaggctgtttct
tttgaaagtttcttgcataccaaatatgtggggcagaaaagattttcattggaagggaac
gagtctttgatcccagctttggacgccgttgtggaaagggctgccgaaatgggcgtggag
cagtttgtgatgggaatggcccataggggtaggttgagcgtacttaccaatattttcgga
aaatcccctaaggatatttttggggagtttgatgggaaggattatgagcaggatattttt
gatggagacgtaaagtaccatttgggatggacctccgataggatgtccgacaatggaaat
aaaataaaaatgaacatagcccccaacccgtcccacttggaaacggtaggtgcggttgtg
gagggaatcacaagggccaagcaagatgagtattaccctgacgatttttctaaagtattg
cccattatagtccatggtgatgctgccatagccggtcagggcttggtatacgaagtagtg
caaatggcagatttggatgggtacagaacaaacggtaccatccatattgtagtgaacaac
caaatagggttcaccaccaattatctcgatgccagaacctctacctattgcaccgatgtg
gcaaaggtgaccttgagtccagtgttgcacgttaatgcagatgatcccgaggccgtggta
catgcttccatgtttgccctggaatataggatgacctttaaaagggatgtcttcttggat
ttattggggtatagaaagtacgggcataatgaaggtgatgagcctagatttacccagcct
aaattgtataaggctattgcaagccatcagaatgcgagagacctttatgcggcgaaatta
attgcagaaggggttatcgacgaaagttttgtgcctaaattggaagaagaatacaaggct
tccctggaagaggatctggaagattccagaaaattggacaaaacggtaattacaccattc
atggcagatgaatggagtggttttgaagcggtgcaggaagaggagatgatgaagccggtg
gataccactttcgataaaaagaaattgaccgagattgccaagatcatcacagaattgccc
aaggggaaaaagttcttgcgcaaggtggtgaagttgatcgatgaccgaaagaaaatgttc
tttgaaacggacactttggattgggccatgggagaacttttggcctatggtacattgttg
catgaaggttacggagtgcgtatgtccggtcaggatgtggagcgtggaacgttttcacac
cgtcatgccgtagtaaaagtagaagaaagtgaagaggagatcatgcaattgaacatgctt
tccgaagatcagggaaggtttcaaatctacaactccctattatcagaatacggggtagtg
ggctttgattatggttatgcgatggccagtcccaataccttgacgatctgggaggcacaa
tttggggatttcagtaatggggcccaaatcatgattgatcaatatatttctgcagctgag
gataaatggaaacttcaaaacggtttggtgatgttgttgccacacggttatgaaggacaa
ggagcggagcattcatcggcaaggatggaacggtacctgcaattatgtgccaaggataat
atgtacattgcagattgtaccaccccagcaaacatgttccatttgttgcgaagacagatg
aaatccaattttagaaaacctttgatcgtgtttaccccaaaaagtctcttgcgtcatcca
aaagcggtttcctctgcagacgagatggccaatggcaaattccaagaggtgatagacgac
gtaagtgcagatgataaaaagataaaaagtctggtcttttgtaccgggaagttctattac
gatctgttggcggtaaaagaggaaaacaatagggatgatgttgccctggtaagggtggag
caattattcccattgcctgcagcccaaatgaaggatatcattgcgaaatataaaaacgcg
gatgacatcgtatgggcacaggaagagccacgtaacatgggcgcctggagccacttgttg
atgcacttcagtgatgtaagcaaattcagggtagcctctagaagattctatgcttctcca
gctgccggtagcgctgtacgttccaaaagacgtcaccaagaagtcattacctatgttttt
gataagacaaaggacaacatggtaagagaaaatataaaataa
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