KEGG   Synechocystis sp. PCC 6803: sll1787
Entry
sll1787           CDS       T00004                                 
Symbol
rpoB
Name
(GenBank) RNA polymerase beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
syn  Synechocystis sp. PCC 6803
Pathway
syn03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:syn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    sll1787 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:syn03021]
    sll1787 (rpoB)
   03400 DNA repair and recombination proteins [BR:syn03400]
    sll1787 (rpoB)
Enzymes [BR:syn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     sll1787 (rpoB)
Transcription machinery [BR:syn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     sll1787 (rpoB)
DNA repair and recombination proteins [BR:syn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      sll1787 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 DUF3786
Other DBs
NCBI-ProteinID: BAA17365
CyanoBase: sll1787
UniProt: P77965
Structure
LinkDB
Position
complement(857558..860866)
AA seq 1102 aa
MTNLATTMLPDLIEIQHASFHWFLEEGLIEELNSFSPISDYTGKLELHFLGKDYKLKQPK
YDVDESKRRDASYSVQMYVPTRLINKETGEIKEQEVFIGDLPLMTERGTFIINGAERVIV
NQIVRSPGVYYKKELDKNGRRTYSASLIPNRGAWLKFETDKNGLVYVRIDKTRKLSAQVL
LKAIGLSDNEILDSLSHPEFYQKTLDKEGNPTEEEALVELYKKLRPGEPPTVSGGQQLLE
SRFFDPKRYDLGRVGRYKLNKKLRLNEADTTRVLTPQDILAAINYLINLEFDVGTTDDID
HLGNRRVRSVGELLQNQIRVGLNRLERIIRERMTVSESDALTPASLVNPKPLVAAIKEFF
GSSQLSQFMDQTNPLAELTHKRRISALGPGGLTRERAGFAVRDIHPSHHGRICPVETPEG
PNAGLIGSLATCARVNDYGFIETPYFRVESGRVRKDLDPVYLTADEEDDMRVAPGDIPTD
EEGNIIGESVPIRYRQEFSTTSPEQVDYVAVSPVQIISVATSMIPFLEHDDANRALMGSN
MQRQAVPLLRPERPLVGTGLEAQAARDSGMVIVSRTHGIVTYVDATEIRVQPHSPDNPAE
KGEEIVYPIQKYQRSNQDTCLNQRPLVYAGEDVVPGQVLADGSATEGGELALGQNILVAY
MPWEGYNYEDAILISERLVYDDVYTSIHIEKFEIEARQTKLGPEEITREIPNVGEDALRN
LDEHGIIRIGAWVESGDILVGKVTPKGEADQPPEEKLLRAIFGEKARDVRDNSLRVPNGE
KGRVVDVRVFTREKGDELPPGANMVVRIYVAQKRKIQVGDKMAGRHGNKGIISRILPIED
MPYLPDGRPIDIALNPLGVPSRMNVGQVFECLLGWAGENLGVRFKITPFDEMYGEEASRD
TVHGLLEEASQRPNKDWVFNENHPGKIQVFDGRTGEPFDRPITVGQAYMLKLVHLVDDKI
HARSTGPYSLVTQQPLGGKAQQGGQRFGEMEVWALEAYGAAYILQELLTVKSDDMQGRNE
ALNAIVKGKSIPRPGTPESFKVLMRELQSLGLDIAAHKVQLSEDGESADAEVDLMIDSQR
RAPNRPTYESLHTEEDLEEEEV
NT seq 3309 nt   +upstreamnt  +downstreamnt
atgacaaaccttgccaccacgatgttgcccgatttaattgaaatccaacacgctagtttc
cactggtttttggaggaaggtttaatcgaggaattgaatagtttttcgccgatttctgac
tacacaggcaagctggaactccactttttgggcaaagattacaagctcaaacaacccaag
tatgatgttgatgaatccaagcgacgggatgctagttattcggtgcagatgtatgtgccg
acccgtctgattaacaaagaaaccggggaaattaaggagcaggaagtcttcatcggcgat
ctccccctaatgacagagcggggaaccttcatcatcaatggtgcggagcgggtcatcgtt
aaccaaattgtgcgatcgccaggggtttactacaaaaaagaattagataaaaacggtcgc
cgcacctattccgcttccctgatccccaaccggggggcctggctgaaatttgaaactgac
aaaaatggtctagtctatgtccgcatcgacaagacccgtaaattgtcggctcaagtgctc
ctaaaggcgatcggtctgagcgataacgaaattctcgactccctcagccacccagagttt
tatcaaaaaaccctcgacaaagaaggcaatcccaccgaagaggaagctttggtggaactg
tacaaaaaacttcgccccggtgagccccccaccgttagtggtggtcaacagttattggag
tcccgcttcttcgaccccaaacgctatgaccttggtcgagtgggacgatacaaactcaat
aaaaaactccggctcaatgaagcggacaccacccgggtgcttaccccccaagacatcctg
gccgccatcaactatctgattaatctggaatttgacgtcggcaccaccgatgacatcgac
cacttgggcaatcgacgggtacgttccgttggagaactattgcagaaccaaattcgggtt
ggcttaaatcgcctggaacggattattagggaacgcatgaccgttagcgaatccgatgcc
cttacccctgcttccttggtgaatcccaagcctctagtggcggccatcaaggaattcttt
ggttcctcccaactgtcccagttcatggaccaaaccaatcccctggcggagttgacccac
aaacggcgtatttctgccctcggccctgggggtctaacccgggagcgggccggttttgcg
gtgcgggatattcacccttcccaccacggccgtatttgcccagtggaaacgccggaaggc
cccaatgccggtttgatcggttccttagctacctgtgcccgggtcaatgattacggtttc
attgaaaccccctattttcgggtggagagtggtcgagtcaggaaagatttagaccccgtt
tacctcaccgccgacgaagaagacgacatgcgggtggcccccggggacattcccacagac
gaagagggcaacatcattggcgagtcggtacctattcgctaccgccaggaattttccacc
accagcccagaacaagttgactatgtagccgtttccccggtgcaaattatttccgttgcc
acctccatgatccccttcctggagcatgacgatgctaaccgggccctaatgggctccaac
atgcaacggcaggcagtgcccctgttgcgtcctgaacggcccttggtcggtacaggcttg
gaagcccaagctgctcgcgactccggcatggtaattgtttcccgtacccatggcattgtc
acctatgtggacgccaccgaaattcgggtgcagccccactcccccgataaccctgcggag
aaaggggaagaaatcgtttacccaatccaaaaataccaacggtctaaccaagatacctgt
ttaaaccaacggccccttgtttatgccggggaagatgtggtgcctggtcaagtgctagcg
gacggttccgccacggaagggggagagctggccctgggccaaaacattctcgtagcctat
atgccctgggagggttacaactacgaagacgccattctgatcagtgaaaggttagtctat
gacgatgtttacaccagtatccacatcgaaaaatttgaaattgaagcccgtcaaaccaag
ctaggacccgaagaaatcaccagggaaatccccaacgtcggggaagatgccctgcgaaat
ctggatgaacatggcattatccgcatcggtgcttgggtggaatccggcgatatcctggtg
ggtaaagtcactcccaaaggggaagcagatcaaccccccgaagaaaaactgctgcgggct
attttcggtgaaaaagctcgggacgtgcgggacaactcgctacgggtacccaacggtgaa
aaaggtcgggtagtggatgtgcgagtgttcacccgggaaaaaggagacgaattacccccc
ggtgccaatatggtggtgcggatttacgtagcccaaaaacggaaaatccaagtgggagac
aaaatggccggtcgccacggcaataaagggattatttcccgcattttgcccatcgaagat
atgccctatctccctgatggtcgccccattgacattgcccttaatcccctgggggttcct
tcccggatgaacgtaggtcaggtgttcgaatgcttgctgggttgggctggggaaaacctt
ggtgtgcgcttcaaaattacccccttcgatgagatgtacggggaagaagcgtcccgggat
acggtccatggcttgttggaagaagcctcccaacggccgaacaaagactgggtatttaac
gaaaaccaccccggcaaaatccaagtgttcgacggccgcaccggggaaccctttgaccgt
ccgattaccgttgggcaagcttatatgctcaaactggtgcatttggtggacgataaaatc
cacgcccgttccaccgggccctactccttggttacccaacagcctttggggggtaaagcc
caacaggggggacagcggttcggagaaatggaagtgtgggccctggaagcctacggcgcc
gcctacattttgcaggaactactcaccgttaaatccgatgacatgcagggtcgtaacgaa
gccctcaatgccattgttaaaggcaagagtattccccggcccggtaccccagaatccttc
aaggtgttgatgcgggaactacaatcccttggtttggacattgccgcccacaaagtacaa
ctgtccgaagatggtgaaagcgccgatgcagaagtagatttgatgatcgacagccagcgt
cgggcccccaatcgtcccacctatgagtccctccacaccgaggaggatttggaagaagaa
gaagtgtag

DBGET integrated database retrieval system