Synechococcus sp. WH 8103: SynWH8103_02554
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Entry
SynWH8103_02554 CDS
T04859
Symbol
som
Name
(GenBank) possible porin
Organism
synw
Synechococcus sp. WH 8103
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
SLH
Motif
Other DBs
NCBI-ProteinID:
CRY93234
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Position
complement(2089558..2091543)
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AA seq
661 aa
AA seq
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MKLLQHLLVAPAALTFLIAPLSAQAADLNIDSVSDYSATLDLEQAKQLLQQVTSVNQFND
VYPTDWAYQALVRLVKTYGCVAGYPNGSFRGYIPITRYEAAALLASCLDRVTEMTEEVEQ
LLKEFESELNFVAGSIMLLEDRVGSLEASQFSTTTKLKGKTTFTMGSTKAYGTNDGSKYY
WNYDRKHQIVEIDGRESPLGSTQNSRSWQKTREAWRAVHNRDGSLKEKDGKRGTEIIKGT
KLEKHYKDIRSRKFRDHKSWKKDATGGGTRAYNSQYGAFTFNYEQKLNLKTSFAGKDLLY
ASFTAGNFCDNAFAGDGVSLTKLSTAPCTEDILGLGRLYYRFPLKNDELIDHSLIFIVGP
MARNTESLGMWPSAYNRGGARILDWTGLAGVPNVYNKATGAMFGVIYKEKTENKGDPAFS
VSMNYVAEDGGDGDPVLGGMFTNNSRGNFLVQAGWGGEEYGVAFAYRYGQCGTGQRRGTN
FMMDDSFNNECWRDVWNWTEEDLYQGDYIAERSERNSHNFALNGYWVPQETGWIPSVSVG
YARSAITGSGFFKYSPVASQSWFVGVKWDDVFDVGNDLGVGFGMPNFATELAGGYSPNDA
NYLVELYASFQVTDNIQITPSVFWMSRPLGHYTANLSGDQDQNGASTFGIFGGLIQSVFR
F
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgctccagcaccttttggtcgctccagcagcgctgacttttttgattgctccc
ctttcggcacaagctgcggacctcaacattgactcggtttcggattactctgcaaccctc
gatcttgaacaggccaagcaactgctgcagcaggtcaccagtgttaatcagttcaatgat
gtatacccaacggattgggcttatcaggccctggtgaggttagtgaaaacctatggctgt
gtggctggttatcccaacggcagcttccgcggctacatcccgatcacgcgttatgaagcg
gcggcgttgttggcctcctgtctcgatcgtgtcacagagatgaccgaagaggtggagcag
ctgctgaaggaatttgaatctgaactcaacttcgtggcgggcagcatcatgctgctggag
gaccgcgttggatccctcgaagccagtcagttttcaaccacgacaaagttgaagggcaag
accaccttcaccatgggttccaccaaggcctatggcacgaacgatggatccaagtattac
tggaattacgataggaaacaccagattgttgaaattgacggtcgtgagtcacccctgggc
tctacgcagaacagtcgctcctggcagaagacccgtgaagcttggcgagccgttcacaac
cgcgatggttcgctgaaggaaaaagacggcaaacgcggtactgagatcatcaagggaact
aagctcgagaagcactacaaagacattcgttctcgtaaattccgagatcacaaatcctgg
aaaaaggatgccacaggaggtggtacccgcgcctacaacagtcaatacggggcctttacc
tttaactacgagcaaaagctgaacctgaagacctcattcgccggaaaggatctcctctac
gcaagtttcacggcaggcaacttctgcgacaatgcctttgctggcgacggtgtgtctctg
acaaaactaagcaccgccccttgtactgaagatattctcggtttagggcgtttgtattac
cgcttccccctgaagaatgatgaactgatcgatcactcgctgatcttcattgttggtcca
atggcgagaaacactgagagcctggggatgtggccgtcggcctacaaccgtggcggagct
cgcatccttgattggaccggactggctggcgtgccgaatgtctacaacaaggccacaggt
gcgatgttcggtgtgatttataaggagaagactgaaaacaagggagatccggcgttctcg
gtctcgatgaactacgtggcagaggacggtggtgatggtgatccggtgcttggcggcatg
ttcaccaacaattcccgcggcaatttcctcgtccaggccggttggggcggcgaggaatat
ggtgtcgccttcgcgtatcgctacggccagtgcggcactggccagcgccgtggaaccaat
ttcatgatggatgattcattcaacaacgaatgctggcgtgatgtttggaactggacggaa
gaagatctttaccaaggcgattacatcgctgaacgcagtgagcgcaacagccacaacttc
gctctgaacgggtattgggtcccccaggaaaccggatggattccctccgtctctgtcggc
tatgcccgcagtgcgatcacgggttcgggattcttcaagtactcccctgtggccagccag
tcctggtttgtcggcgtcaaatgggatgacgtgttcgatgtcggtaacgaccttggtgtc
ggcttcggtatgcccaacttcgcgactgagctggccggtggctattccccaaatgatgcc
aattacctcgtggagctctacgcctccttccaggtcaccgacaacattcagatcacgcca
tcggtgttctggatgtcacgtcctctgggtcactacaccgccaacctcagcggtgatcag
gatcagaacggtgcatcgaccttcggcatctttggtggtttgattcagtcggtcttccgg
ttctga
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