Synechococcus sp. WH 7803: SynWH7803_1262
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Entry
SynWH7803_1262 CDS
T00524
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
syx
Synechococcus sp. WH 7803
Pathway
syx00300
Lysine biosynthesis
syx00470
D-Amino acid metabolism
syx01100
Metabolic pathways
syx01110
Biosynthesis of secondary metabolites
syx01120
Microbial metabolism in diverse environments
syx01230
Biosynthesis of amino acids
Module
syx_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
syx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SynWH7803_1262 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SynWH7803_1262 (dapF)
Enzymes [BR:
syx01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SynWH7803_1262 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
CAK23688
CyanoBase:
SynWH7803_1262
UniProt:
A5GL73
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All DBs
Position
1154109..1155215
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AA seq
368 aa
AA seq
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MLQFSKYQGLGNDFILVEGRDGRLSESIVSPDSDWVRKICDRRFGLGGDGLILALPPQGQ
GELRMRIFNADGSEAEMCGNGIRCLARFLADSDGDSPGRSWSIETPAGMIIPELQQDGQI
RVDMGAPFLKPEMVPTLLSPDAKGLPRGEVSREGLTLSLAAVGMGNPHVVVPVDDLEAIP
FEALGAQLECDPLFPAKTNVHFLKVHGRQHLEIRVWERGAGPTLACGTGACATLVAAVLM
GLSDSEATVVLPGGPLSIRWSDQQGSVFMTGPAVAVFDGVMNPDLMPEGRPDGLAAEPKP
LESSTPPGFDCANDCKEGCRQPDRCLREEAQAKVQAFLASTSLDSMINLAGDSLEQRTLS
RIQRDGQG
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaattcagtaaatatcaaggtctcggcaacgacttcatcttggtggagggtcgt
gatggccggctttcggagagcatcgtctctcccgattctgactgggtccgaaaaatttgc
gatcgccgtttcggccttggcggcgatggcttgattctggcgctgcctcctcagggccag
ggcgaactgcgcatgcgcatttttaacgccgatggttcggaagctgagatgtgcggaaac
ggaatccgctgcctcgcccgtttcctcgccgacagtgatggcgatagccccggacgcagc
tggagcattgaaacgccagccgggatgatcattcccgaacttcaacaggacggacaaatc
cgcgtcgatatgggcgctccgttcttgaagcctgagatggttccgacgctcttgagcccg
gacgccaagggcttgccccgcggtgaagtgtcccgagaaggactcacactttcattggca
gcagtggggatggggaacccccatgtggtggttcccgtggacgatctggaggcgattccg
tttgaagcactgggtgctcagctcgaatgcgacccgctcttccctgcgaaaaccaacgtt
cactttctcaaggtgcatggccgtcagcatctggagattcgcgtctgggaacggggagca
ggtccaaccctggcttgtgggaccggggcctgcgccactttggtggcggccgttctgatg
ggacttagcgacagcgaggcaaccgtggtccttcccggcggtcccctcagcatccgttgg
tctgatcagcaggggtcggtcttcatgaccggtccagctgtggctgtcttcgacggcgtc
atgaatccagacctgatgcctgaggggcgtcctgatgggttggcagccgaacccaagccc
ttggagtcttcaacgcctccagggtttgactgcgccaacgactgcaaagagggctgcagg
caacctgatcgttgtctgcgcgaggaggcccaggccaaggttcaagcgtttctggcatcc
acgtccctggattccatgatcaatctcgccggagattccctcgagcagcgcacgctgtcc
cgcatccagcgtgatggacaaggctga
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