Shinella zoogloeoides: K8M09_17855
Help
Entry
K8M09_17855 CDS
T07727
Name
(GenBank) efflux RND transporter permease subunit
Organism
szo
Shinella zoogloeoides
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
MMPL
Motif
Other DBs
NCBI-ProteinID:
UEX81409
LinkDB
All DBs
Position
3638632..3641832
Genome browser
AA seq
1066 aa
AA seq
DB search
MTPPRLNLGLAGGLTRAFIGSPLTPLFLLAAFVLGLVALVSLPREEEPQISVPMVDIRVQ
ANGLKTEDAVKLVTEPLETIVKAIDGVEHVYSQTEDDGALVTARFKVGTNADAAILRVHE
KVRANMDRIPVGIPDPLIVGRGIDDVAIVVVTLRPTQKSAGHWTANGLTRLARELQVEVA
KLPDIGLTYIAGEQPEQFEVEPDPEKLSLYGITLQQLAAKIEGANRSFRVGTVREGGQQR
AIVAGQTLQELSEIGNILLTARDGRPVYVRDVAKTVLATSPAEARVTDVRSTADGLQRVP
AVSLAIAKRPGTNAVVIADDIVKRLEQTRGQIFPKDVEMTVTRDYGETANEKANELLFHL
GLATVSIVFLVAIAIGLREAMVVAVVIPITILLTLFASWLMGYTLNRVSLFALIFSIGIL
VDDAIVVIENIARHWAMQDGRSRSAAAVDAVAEVGNPTIVATLTVVAALLPMLFVSGMMG
PYMSPIPANASAAMLFSFFVAVILTPWLMMKLGRKEAVRGHAHAAADGGRLGRIYAMVAR
PVLRSRARAWAFLLVVGMATIASLGLLYTKHVTVKLLPFDNKTNLQVIVDLPKGSSVEDT
DRTLQQMVERLGDMPEIVSFQTYAGTASPFDFNGLVRHYYLRAEPQQGDIVVNLLPKGSR
GRASHAIALDIRKRLEGLALPQGTVAKVVEPPPGPPVLGTLLAEIYGPDAETRRAVAGKV
REAFKSVPFIVDVDDSYHNQPQRMRVAIDQDNLDYYRVEQSDVYDTLRYLYGGTTVGYSH
RGGGRQPIPIRIALPKGEKVIDERALTTPVPANALPAGLGVVELGDVVSVSEQPASYPVF
RHNGRAAEMVMAELAGAYEAPIYGMLAVNDAISKADWGNVPKPVIALHGQPDDETRPILL
WDGEWEVTWVTFRDMGAAFMVAILGIYILVVAQFGSFKLPLVILTPIPLTFIGIMLGHWL
FAAPFTATSMIGFIALAGIIVRNSILLVDFIRHSGGQGRPMVDVLLEAGSVRFKPILLTA
LAAMIGAGVILTDPIFQGLAIALLFGLVSSTLLTVLVIPAIYVALK
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgccaagacttaatctcggtctggccggtggcttgacccgtgccttcatcggc
tcgccgctaacgccgctcttcttgctggccgccttcgtcctggggctggttgcactggta
tcgttgccgcgcgaggaggagccgcagatctcggtgccgatggtcgatatccgcgtacag
gcaaacggcttgaagaccgaggatgcggtcaagctcgtaaccgaaccgctcgagaccatc
gtcaaagcgatcgacggcgtcgaacacgtctattcccagaccgaggatgatggtgcgctc
gtcacggcgcggtttaaggtcggcaccaatgccgatgccgcgatcctgcgggtgcatgag
aaggtccgggcgaacatggaccgcatccccgtcggcattcccgatccgctgatcgtagga
cgcgggatcgacgatgtggcgatcgtcgtcgttacgctgcggccaacacagaagagcgcc
gggcactggaccgccaacgggctgacaaggctggcgcgcgagctgcaggtcgaggtcgcc
aagctgcctgatatcggcctcacctatatcgctggcgagcagcccgagcagttcgaggtc
gagccagatccggaaaagctctcgctctatggcatcacccttcagcaactcgccgccaag
atcgagggggcaaaccgttccttccgcgtcggcacggtgcgcgaaggcggccagcagcgc
gcgattgttgccgggcagacgctgcaggagctctccgaaattggcaacatccttctcacc
gcgcgcgacggcaggcccgtctatgtgcgcgatgtcgcaaaaacggtccttgccacctcg
ccggcggaggcccgtgtcaccgatgtccgttcgacagcagatgggctgcaaagggttccg
gcggtttctcttgcgatcgccaagaggccaggcaccaatgccgtggtcattgccgatgat
atcgtaaagcgtctggagcagacccgcggccagatctttccgaaggatgtcgagatgacg
gtcacgcgcgattacggcgagaccgccaacgagaaggcgaacgagctcctgttccatctt
gggctcgcaaccgtctcgatcgtcttcctggtcgccattgccatcggcttgcgcgaggcg
atggtggtcgcggtcgtcattccgatcaccatcctgctcacgctcttcgcgtcctggctc
atgggctatacgctgaaccgtgtcagcctgttcgccctgatcttttcgatcggcatcctg
gtcgacgacgccatcgtcgtcatcgagaacatcgcccgccactgggccatgcaggacggc
cgatcgcgcagcgcggccgctgtcgacgccgttgccgaggtcggcaacccgaccatcgtc
gccacgctgaccgtcgtggctgcgctccttccgatgttgttcgtgtcggggatgatggga
ccctatatgagcccgatcccggcgaacgcctcggcagcgatgctgttctctttcttcgtc
gcggtgatccttacgccctggctgatgatgaagctcggccggaaggaggcagtgcgcgga
cacgctcatgccgcggccgatggagggcgtctcggcagaatttacgcgatggtcgcgcgg
cctgtcctgcggagccgcgcccgggcctgggcgttcctgctggtcgtcggcatggccacg
atcgcgtcgcttggccttctctacaccaagcacgtcaccgtcaagctgctgcccttcgac
aacaagaccaaccttcaagtgatcgtcgacctgcccaagggctcttcggtcgaggatacg
gaccggacattgcagcaaatggtggagcggctgggcgacatgccggagatcgtatccttc
cagacctatgccggaacagcgtcacctttcgacttcaatggattggtgcggcactattat
ctgcgcgccgaaccgcagcagggcgatatcgtcgtcaaccttctgcccaaaggctcgcgc
ggccgcgcgagccatgcgatcgcccttgatattcgcaagcgcctcgagggccttgcgctg
ccgcagggaacagtggcgaaagtggtggaaccgccgcctggcccgcctgtgctggggacg
ctgctggctgagatatacggaccggacgccgagacgcgccgtgccgtcgccggaaaggtt
cgcgaggccttcaagagcgtgcccttcatcgtcgacgtcgacgacagctaccacaatcag
ccgcagcgtatgcgtgtcgcgatcgaccaggacaatctcgattattatcgggtcgagcag
tccgacgtctatgacacgttgcgttatctctatggcggcaccacggtcggctattcgcat
cgcggcggcggccgtcagccgatcccgatccgcatcgccctgccgaagggtgagaaggtg
atcgacgaacgcgcgctcaccacgccggtcccggccaacgcgctgccggcgggccttggt
gtcgtcgaactcggcgacgtcgtgtcggtctccgagcagccggcatcgtatcctgtcttc
cggcacaatggccgggcggcggagatggtcatggcagagcttgccggcgcttacgaagcg
ccgatctacggcatgctcgccgtgaacgatgcgatttccaaggcggattggggcaatgtt
ccgaagccggtgatcgcgctccacggtcagcccgatgacgaaacccgcccgatcctgctc
tgggatggcgagtgggaggtgacttgggttactttccgcgacatgggcgcggcgttcatg
gtggcgatcctcggcatctatatccttgtggtcgcgcagttcggctcgttcaagcttccg
ctggtcatcctgacgccgatcccgctcaccttcatcggcatcatgctcgggcattggctg
ttcgcggcgccgttcacggcaacctcgatgatcgggttcatcgcgcttgccggcatcatc
gtgcgcaattcgatcctgctggtggatttcatccgccattccggggggcagggcaggcca
atggtcgatgtactgcttgaggccggctccgtccgcttcaagccgatcctgctgaccgcg
ctcgccgcgatgatcggcgcgggcgtgatcctgaccgacccgattttccaggggctcgcc
atcgcgctgctgttcggtctcgtctcctcgacgcttctcacggtgctcgtcattccggcg
atctatgtggcgctgaaatga
DBGET
integrated database retrieval system
