Trichoplax adhaerens (placozoan): TRIADDRAFT_54096
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Entry
TRIADDRAFT_54096 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRIADDRAFT_54096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tad03019
]
TRIADDRAFT_54096
Enzymes [BR:
tad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
TRIADDRAFT_54096
Messenger RNA biogenesis [BR:
tad03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
TRIADDRAFT_54096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
ResIII
AAA_19
AAA_14
AAA_22
T2SSE
ATPase
nSTAND3
NACHT
Motif
Other DBs
NCBI-GeneID:
6751486
NCBI-ProteinID:
XP_002110271
JGI:
54096
UniProt:
B3RR35
LinkDB
All DBs
AA seq
897 aa
AA seq
DB search
MGWLEYVAKERKKWKREKSFLEKIRYASVKKSKERRKKEKPGKGQKATRIKTDTRKQEVI
ASLIHQVKTERNSNRQHLHDSVVNDIHQIVRNSRSLQKRQRLDDLYKEQLNETRTTPHYQ
QLLDVRKKLPIFSMQNKILKSIRDNQAIVISGHTGCGKTTQLPQFILDEAIDNNNGSLCK
ILCTQPRRISAISVAERIQDERGEKKQPGSSVGYQIRLETKLPRRYGSIILCTTGILLRK
LQSDPLLSQYSHLIIDEIHERDAMSDFLLICLQDILVKRPDLKVILMSATLNAKKFSQYF
NNCPIIEIPGTLYPVKHYYLEDIITFLNNRKNYYQPKVRNPQDSGEDKMNNEIISSETDA
WYKYLETTSNKYSPTVAKSIKQMAFKKLDFTLIQDLLIHINSNMEEGAILCFVPGWDDIR
KLYETLIGNPRFSSDQYVILPLHSQLSTANQRKIFDKPQQSVRKIIIATDIAETSITVND
VCFVIDCGKVKEKLYDAVGGFETLAPVWTSKSSARQRAGRAGRVQPGHCFYLYPKFIAQH
MQEYNLPEILRTPLDELCLQIKKLNLGMISPFLSKALDPPDDGAVARAIHLLKDLNAMNS
DESLTPLGYYLATLPVDPRIGKIILFGAMFSCLYPAVVISAFLATKDPFIFPMDRKAEVY
KIRKKFSGNSFSDHLTSVVAFYTWEKAMQRKTAAEFCRDNYLSQSGLRTILGLAQQFCNL
LYEIGFVDTKNIRSQNYNYNSSNEKLLKAIICAGLYPSVLQIKYRNNKRRSPRFYTRSGE
QVNLHQSSVLSNYRRFDSDWLVYHKKMKLGEQVHVFDTTMVSPLSLLFFGGDIDVKQQLR
RQLDNYLEQKINQPSLKLTASEDSSDLKGRLLHEIISLITEENVSEQIKRRKIYEPN
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgggttggcttgaatatgttgcaaaagagagaaagaagtggaaaagggaaaaatcgttt
cttgagaagatccgatatgcgtctgtcaagaaaagtaaagaaaggagaaaaaaggaaaaa
ccaggaaaaggccagaaagcaactcgaattaaaacagatacgagaaaacaagaagttatt
gcatctctcattcatcaagtcaaaactgaacgcaacagtaatagacaacaccttcatgac
agtgtagtcaatgatatccatcaaattgtaagaaatagtcgatcattgcaaaaacgtcag
cgtctggacgatttgtataaagagcagctaaacgaaacccgaactactccacattatcag
caacttttagatgttagaaagaaacttccaatattcagtatgcaaaataaaatcctcaag
tctattcgtgataaccaggctatagtaataagtggccataccggatgtggtaaaaccacg
cagttaccacaatttatacttgatgaagctattgataataacaatgggtcgttgtgtaaa
attttatgcacacagccacgacgaattagtgctatatctgtagccgaacgtattcaagat
gagcgtggagagaaaaagcagccaggttctagtgttggctatcagataaggcttgaaact
aaactaccgcgacgttatggatcaataattctttgtacaactggcatcttattacgtaaa
ttacaaagtgatccgctactttctcaatacagtcatctcattattgatgaaattcacgaa
agagacgctatgtcggattttctgctgatatgtttacaagatatattagttaaaaggccc
gatctaaaggttatcttgatgagtgctaccctaaatgctaaaaaattttcacaatacttt
aacaattgtcctattattgaaattcctggaactctctatcctgttaaacactactattta
gaagacattatcactttcttgaataatagaaaaaattattatcaaccaaaagtaagaaat
ccacaagacagtggtgaagacaaaatgaacaatgagatcatttcttcggagactgatgca
tggtataaatatttagaaaccacctcgaataagtattctccaacagtggccaaatcgata
aagcaaatggcattcaagaaattagactttacattaatacaagatttattaattcacatt
aatagtaatatggaggaaggtgcaattttatgttttgttcctggatgggatgatattcgt
aagttgtatgagacattgataggaaatccacgtttttcatcagatcaatatgtaattctt
ccattgcattcgcaattatcgactgcaaatcagcgtaaaattttcgataagccgcaacaa
tcagttcgaaaaattattattgctaccgatatcgccgaaacaagtattactgttaatgac
gtatgctttgtgatagactgtggaaaagtaaaagagaaactctatgatgcggtcggcggc
tttgaaactctggctccggtttggactagtaaatcatcggcacgtcaacgggccggtcgg
gctggaagagtccaaccaggccattgcttttacctttatccgaaattcatagcacagcat
atgcaagagtacaacttacccgaaatactaaggactcctttggatgaactgtgtctacaa
ataaaaaaacttaacctaggcatgatatcacctttcctatcaaaagcgttggatcctcct
gatgatggagccgttgcaagagcgatacatctattaaaagatttgaacgctatgaatagt
gatgaatcattaacacctcttggctattatcttgctacattgcctgttgatccccgaatt
ggaaagattattttatttggtgctatgttctcatgtttatatcctgcggttgtcatttcg
gcattcttagctaccaaagatccatttatctttcccatggatcgtaaagctgaagtgtac
aaaattcgcaaaaaattttctggcaattcatttagtgatcacttgacatcagttgttgca
ttttacacatgggaaaaggctatgcaaaggaaaactgcagctgaattctgccgggacaat
tacttatctcaaagcggccttcgaactattcttggattagctcaacaattttgtaatctc
ctgtatgaaattggttttgttgacacgaaaaacattagatcgcaaaattataattataac
tcaagcaatgagaaacttctcaaagcaataatatgtgctggtctatatcctagtgttctc
cagataaagtatagaaataataagagaaggtcgcctagattttatactcgttccggtgag
caagttaatttgcatcaaagttctgttctcagtaattatagacggtttgatagcgattgg
ttagtctatcataagaaaatgaaattaggcgaacaggttcatgtatttgacacgacgatg
gtttctcctttatcattactcttttttggaggtgatattgatgtaaagcagcaattaaga
cgtcaattggataattacttggaacagaaaattaatcaaccgtcattaaaactaacagca
tcagaagactcttctgatcttaaagggagattattacatgaaatcatttccctcataact
gaagaaaatgtatctgagcagattaaaagaaggaaaatttatgagccaaactga
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