Triticum aestivum (bread wheat): 123103412
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Entry
123103412 CDS
T07757
Name
(RefSeq) 30S ribosomal protein 2, chloroplastic-like
KO
K13126
polyadenylate-binding protein
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03015
mRNA surveillance pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123103412
09123 Folding, sorting and degradation
03018 RNA degradation
123103412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123103412
03041 Spliceosome [BR:
taes03041
]
123103412
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123103412
mRNA cycle factors
Stress granule specific factors
123103412
Spliceosome [BR:
taes03041
]
Complex C
Other components
Complex C specific factors
123103412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
123103412
NCBI-ProteinID:
XP_044380928
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Position
5A:complement(367395570..367397709)
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AA seq
244 aa
AA seq
DB search
MATTISSLAAPPSLHRRCCRSPASASTPARVSFRAAPPAGAAARARRRAAVKVLASSAVM
EAPEELATRKLYVGNIPRTVTNDELSAMFAAHGTVVRAEVMYDKYSGRSRRFGFVTMSTA
EEVAAAIESLNDTEVGGRKIKVNVTESFLPNIDTSAPESEPSFVDSQYKVYVGNLAKKVT
TEVLKNFFSEKGEVLSATVSRIPGTPKSKGYGFVTFSSEEEVEAAVSTFNNAELEGQTIR
VNRA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaccatctcctctctagcggcccctccctccctccaccgccgctgctgccgg
agccccgcatccgcctcgacccccgcccgcgtgtcattccgcgccgcgccgccggccggc
gcggcggcgcgggccaggcgccgggcggcggtgaaggtgctcgcctcctccgcggtgatg
gaggcgcccgaggagctggccacgcggaagctctacgtggggaacatccccaggaccgtc
accaacgacgagctgtcggccatgttcgccgcacacggcaccgtcgtgcgggccgaggtt
atgtatgacaagtatagtggtcggagccggcgattcgggtttgtcacgatgagcacggcg
gaggaggtcgctgctgccattgagagcctgaatgacacagaggttggaggtagaaaaatt
aaagtgaatgtgacagagagcttcttaccaaacattgatacatctgcaccggaatcggaa
ccttcatttgtggacagccagtacaaggtttatgttggcaatcttgcaaagaaagtgaca
acggaagtgctcaagaacttcttctctgaaaaaggggaggtcctcagtgccacggtatcc
cgaattccgggaactccaaagtccaagggatatggttttgtcacgttttcttcagaggaa
gaagtggaagctgcggtttctactttcaataatgcagaattggaaggacaaaccatccgt
gtgaatagagcatag
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