Tyto alba (Barn owl): 116964729
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Entry
116964729 CDS
T07816
Symbol
MEX3D
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein MEX3D
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
tala
Tyto alba (Barn owl)
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tala03019
]
116964729 (MEX3D)
04121 Ubiquitin system [BR:
tala04121
]
116964729 (MEX3D)
Enzymes [BR:
tala01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116964729 (MEX3D)
Messenger RNA biogenesis [BR:
tala03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
116964729 (MEX3D)
Ubiquitin system [BR:
tala04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116964729 (MEX3D)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
zf-C3HC4_3
zf-RING_2
KH_2
zf-C3HC4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
116964729
NCBI-ProteinID:
XP_042650923
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MPGSIYQPEGGQPARGPPRCLALLSPPPPAGQEPPPEPEREREGPPPPPPPAQDEAAALR
FALDQLSLLGLEEAGERGAGGGGGRRGAGGAGGGGAGRPAGAGGGGGGSPPAAGAASPPA
AFGNFAPHLAPPAALLAEPLGALGSRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRA
KTNTYIKTPVRGEEPVFIVTGRKEDVEMAKREILSAAEHFSMIRATRNKVNGLTGAMQGP
PNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENV
DRAREEIEAHITMRTGSFVDVNADNDFHSNGTDVCLDLQGSTAGLWAKAPHPARRPSAAL
RNDSLGSLGSASTESYYSGRVADASPTSPYSTSSGFTFSEPPAPLGSEECDFGFDFLALD
LTTPTTAIWSPFERSGHPLQAFSSCSSINGSQRRSSGAATPRHSPTLPESGGGALEHPLA
RRIQSDPVSTLSWLPAQGSLSSFSNSTGYSSSSSLPGSVSAASGSPTDSSSSDGHRKSSR
ECMVCFESEVIAALVPCGHNLFCMECAMRICGKAEPECPACHTPATQAIHIFS
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcccggctccatctaccagcccgagggcgggcagcccgcccgcggcccgccgcgctgc
ctggcgctgctcagcccgccgccgcccgccggccaggagccgccgccggagcccgagcgg
gagcgggaggggccgccgccgccgccgccgccggcgcaggacgaagccgccgccctgagg
ttcgccctggaccagctctcgctgctggggctggaggaggcgggcgagcgcggggcgggc
ggcggaggcgggcggcgcggggccggaggagccggaggcggcggggccgggcggcctgcg
ggagcgggcggcggcggcggagggtcccccccggccgccggcgccgcctcccccccggcc
gccttcgggaacttcgccccgcacctggcgccgcccgccgcgctgctggccgagccgctg
ggcgcgctggggagcaggaagaagagcgtgaacatgaccgagtgcgtgcccgtgcccagc
tccgagcacgtcgccgagatcgtgggccggcaaggctgcaaaatcaaagccctacgcgcc
aagaccaacacgtacatcaagacgccggtcaggggtgaggagcccgttttcatcgtgact
gggaggaaggaggacgtggagatggcgaaaagggagatcctctcggctgcagagcacttc
tccatgatccgggcgacgcgcaacaaagtgaacgggctgacgggagcgatgcaggggccc
cccaacctgccgggacagaccaccatccaggtgagggtcccgtaccgtgtggtagggctg
gtggtgggccccaagggagccaccatcaagcggatccagcagcagacgcacacttacatc
gtgacgcccagccgggacaaggagcccgtcttcgaggtgacgggcatgcccgagaacgtg
gaccgggcccgggaggagatcgaggcgcacatcaccatgcggacaggctccttcgtggac
gtcaatgccgacaacgacttccactccaacggcaccgacgtctgcctcgacctgcagggc
agcacggccggcctgtgggccaaggccccccaccctgcccggcgcccctcggccgccctc
cgcaacgacagcctcggctccctgggcagcgcctccaccgagtcctactacagcgggcgg
gtggcggacgccagccccaccagcccctacagcaccagcagcggcttcaccttcagcgag
ccgccggccccgctgggctcggaggagtgcgacttcggcttcgacttcttggccctcgac
ctcacgacgcccaccaccgccatctggtcgcccttcgagcgctcgggccaccccttgcaa
gccttcagcagctgctcctccatcaacggctcgcagagacgcagcagcggcgcggccacc
ccgcgccactcgcccaccctccccgagagcggcggcggggccctggagcacccgctggcg
cgccgcatccagagcgaccccgtcagcaccttgtcctggctgcccgcccagggctcgctg
tcctccttctccaacagcaccggctactcctcctcctcctccctgccgggcagcgtctcc
gccgcctcgggctcacccaccgactccagcagctccgacgggcaccgcaagagctcccgc
gagtgcatggtgtgtttcgagagcgaggtgatcgccgccttggtgccctgcggccacaac
ctcttctgcatggagtgcgccatgcgcatctgcggcaaggccgagcccgagtgccccgcc
tgccacacgcccgccacgcaagccatccacatcttctcctag
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