Thermoplasmatales archaeon BRNA1: TALC_01087
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Entry
TALC_01087 CDS
T02532
Name
(GenBank) Superfamily II DNA and RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tar
Thermoplasmatales archaeon BRNA1
Pathway
tar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TALC_01087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tar03019
]
TALC_01087
03009 Ribosome biogenesis [BR:
tar03009
]
TALC_01087
Enzymes [BR:
tar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TALC_01087
Messenger RNA biogenesis [BR:
tar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TALC_01087
Ribosome biogenesis [BR:
tar03009
]
Prokaryotic type
rRNA helicases
TALC_01087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DbpA
CMS1
MukB_hinge
ERCC3_RAD25_C
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGI48077
UniProt:
M4YNT8
LinkDB
All DBs
Position
complement(985015..986781)
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AA seq
588 aa
AA seq
DB search
MRAVRSAGWTEPTPVQTAAIPVGLNGEDLFAQAQTGTGKTGTYGSIILSRTEAGSAGPTS
LILVPTRELATQVAEELDRLSKYSRHTSLPIYGGVSIENQVKELKKGADVIVATPGRLKD
LIERKSVNLSEISIVVLDEADRMLDMGFAPSVNMILNRLPKKRQTMMFSATMPDDVRKMA
VKYMINYREILVSKDEPTLDLTAQYFIMTNRDSKRDELIHIIEDGYPKMMVFCRTKRKVD
FLTRKMKRDKYSVEGIHGDVGQSKRERIIQEFKDGDLKVLIASDVASRGLDIDGVDVVVN
FDIPVDPETYIHRIGRTGRAGNTGRAITFVTEDDIKQLNAIEKAVGRRIVELPFTSDKYE
YVPVEEPKKRAKEIKQRNAAKKVAAETAAKAPEKAARLRKTVEAAEEGGRKKTARTLSGA
LDRPVKGKAKKAQREQPREEPKAPVRVKEPEVKKVVKEPPREEPKPEPVQETGGRFVYTP
QGVPKNPRPLHAYVQIDRAPAPEKDMTMDRLELSIGSNDGVTVDNLAKFIVRVAGIAPKD
IGNIHVYADKSRVQVVRWRSQEVVDEVFGQTFNDKRRVLITNLSDKRL
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
ttgagggccgtcagatccgcaggatggaccgaacccacccctgttcagaccgctgccatt
cccgtcggcctcaacggcgaggaccttttcgcccaggcacagaccgggaccggtaagaca
gggacatacggttcgatcatactcagcaggacggaggccggttccgccggccccacctcg
ctgatcctcgtgcccacccgcgagctcgcgacccaggtcgcggaggagctcgacaggctg
tccaagtacagcaggcacacgtccctccccatctacggaggggtcagcattgagaaccag
gtcaaggagctcaagaagggggccgacgtcatcgtcgccacccccggcaggctcaaggac
ctcatcgaacgcaaatccgtgaacctctcggagatatccatcgtcgtcctcgatgaggcg
gacaggatgctcgacatgggattcgcacccagcgtcaacatgatcctcaaccgtctcccc
aagaaaaggcagacgatgatgttctccgccaccatgccggacgacgtccgcaaaatggcc
gtgaagtacatgatcaactacagggagatcctcgtctccaaggacgagcccaccctggac
ctgaccgcgcagtacttcatcatgaccaaccgcgattccaagagggacgagctcatccac
atcatcgaggacggatacccgaagatgatggtgttctgcaggaccaagcgcaaggtagac
ttcctcacccgcaagatgaagagggacaagtacagcgtcgaggggatccacggcgacgtg
gggcagagcaagcgcgaacgcatcatccaggagttcaaggacggggacctgaaggtcctt
atcgccagcgatgtagcatccaggggactggacatcgacggcgtcgatgtggtggtgaac
ttcgatatccccgtcgatcccgagacctacatccaccgcatcggaaggaccggcagagca
gggaacaccggaagggcgatcaccttcgtcaccgaagacgacatcaagcagctgaacgcc
atcgagaaggctgtcggcaggcgcatcgtcgagctcccgttcacttccgataagtacgag
tacgtgcccgtcgaggagcccaagaagagagccaaggagatcaagcagcgcaacgctgct
aagaaggttgccgcggagaccgctgccaaggccccggagaaggccgctaggctcaggaaa
accgtggaggcagcggaggagggaggaaggaagaagaccgcccgtaccctctccggagcc
ctcgacaggcccgtcaagggaaaggccaagaaagcccagagggagcagcccagggaagag
ccaaaggcccccgtcagggtaaaagagccagaggtcaagaaagtcgttaaagagccgccc
agggaggagcccaagcccgagcccgtccaggagaccggggggaggttcgtctacaccccc
cagggcgttcccaagaaccccaggcccctccatgcttacgtccagatcgacagggcgccc
gccccagagaaggacatgacaatggaccgtctcgagctctccatcggatccaacgacggc
gtcaccgtcgacaacctggcgaagttcatcgtcagggtcgcaggtatcgcccccaaggac
atcggcaacattcatgtgtatgccgacaagtccagggtccaggtcgtgaggtggcgctcc
caggaggtcgtcgacgaggtcttcggacagaccttcaacgacaagcgccgcgttctcatc
actaacctctccgacaagaggctctga
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