Thiobacillus denitrificans: Tbd_0127
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Entry
Tbd_0127 CDS
T00275
Name
(GenBank) outer membrane protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
tbd
Thiobacillus denitrificans
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tbd02000
]
Tbd_0127
Transporters [BR:
tbd02000
]
Other transporters
Pores ion channels [TC:
1
]
Tbd_0127
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
OmpA_membrane
DEC-1_N
DUF4799
Motif
Other DBs
NCBI-ProteinID:
AAZ96080
UniProt:
Q3SMG5
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All DBs
Position
136341..137588
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AA seq
415 aa
AA seq
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MRGGRTCALACIDPAESDSCSINSRNGPGAGVFRTSPSRSYARGRASQAPGGGRKVCASR
GLVGVFRVTTSIEGEKRMRIRTLPVCLALAAAVVQAHAADDRFYLAPSVNYTFADSDRQA
DDDWGLGLALGKPVSRHWNLELALSGASLNMDSGGGEYDLIGLGVDAVYLVNRDADFTPY
GVVGVGALRTDIPGSDDVGVAASAGVGVLKRLTENVALRADARYRWDDNAADAFNEDNFG
DWIVGVGLTIALGKSAQAAPAPQAAVEPVPAPEPAPAAPEPAAAPAPALQTEQAAQLERS
QAGDVVVLPEGVNFAFDSAELRPDAVTVLDEAVTVLNRRTDIKVDVVGHTCNIGPEAYNQ
GLSERRAKSVYDYFIDNGVAADRLTTQGYGETRPAYSNDTREGREKNRRVELHVK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
gtgcggggcggcaggacctgcgctctcgcatgcatcgacccggcggaatccgattcttgc
tctataaacagtaggaatggaccgggtgcgggggtttttcgtacgtccccttcacgttcg
tacgcccgagggagggcgtcgcaggctcccggcggcgggcggaaggtgtgtgccagtcgg
ggacttgtcggggtgtttcgtgtaacgacgtcaatcgaaggagaaaaacgcatgcgcatc
agaacccttcccgtctgtctcgccctcgccgcggccgtggtccaggcccacgcggcggac
gaccgcttctacctcgcgccgtcggtgaactacaccttcgcggacagcgaccgccaggcc
gacgatgattggggtctgggcttggcgctcggcaagccggtcagccgccactggaatctc
gagctcgcgctctccggtgcctccctgaacatggatagcggcggcggcgagtacgacctg
atcgggctgggcgtcgatgcggtgtatctggtgaaccgcgacgccgatttcacgccgtat
ggcgtcgtcggcgtcggtgcgttgcggaccgatatccccgggtccgacgacgtcggcgtc
gcggcgagcgccggcgtgggcgtgctcaagcgcctgaccgagaacgtcgccttgcgcgcg
gacgcacgctatcgctgggacgacaacgccgccgacgcgttcaacgaggacaatttcggc
gactggatcgtcggcgtcgggctcacgatcgcgctcggcaagtccgcacaggccgcgccc
gccccgcaggccgccgtcgagcccgtgcccgcgccggaaccggctcccgccgcgcccgaa
ccggcggcggcgcctgcgcccgcgctgcagaccgaacaggcggcccagctcgagcggtcg
caggccggcgacgtggtggttctccccgaaggcgttaatttcgcattcgattccgccgag
ctgcgtccggacgccgtgaccgttctcgacgaggcggtgaccgtgctcaaccgccgcacc
gacatcaaggtcgacgtcgtcggccacacctgcaacatcggccccgaggcctacaaccag
ggcctgtcggagcgccgcgccaaatcggtatatgactatttcatcgacaacggcgtcgcc
gccgaccggctcactacccagggctacggtgaaacccgtccggcgtacagcaacgacacg
cgggaagggcgggagaaaaaccggcgcgtcgaactgcacgtgaaataa
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