Treponema brennaborense: Trebr_1170
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Entry
Trebr_1170 CDS
T01489
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tbe
Treponema brennaborense
Pathway
tbe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Trebr_1170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbe03400
]
Trebr_1170
Enzymes [BR:
tbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Trebr_1170
DNA repair and recombination proteins [BR:
tbe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Trebr_1170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
Helicase_C
PriA_CRR
ResIII
AAA_30
ATPase_2
AAA_16
ADDB_N
AAA_22
SLFN-g3_helicase
AAA_25
zinc_ribbon_15
PhoH
T2SSE
AAA_19
AAA_11
zinc-ribbons_6
Motif
Other DBs
NCBI-ProteinID:
AEE16598
UniProt:
F4LL01
LinkDB
All DBs
Position
complement(1389310..1391364)
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AA seq
684 aa
AA seq
DB search
MIRYVETVLNVPLPQSFTYLADGDTAEAVRPGMRAEVRFGSRRMTAFIVSVADVPPAHLA
VPAEKLKYLTRLLDAEPVFTAEHIALSAWIARYYLCTQGEAISAMIPSGKRETDSPGFSF
TDDAIEFEARTLSEEQKRAAEGIFAPGSKLHYVYGPTGTGKTEVFLQAAQKMLDEGKGVI
YLVPEIGLTHQVREAVVRRFGHTAAVLHSELTPSQRLKQWKRILEKDARVVIGARSAVFA
PVPDLGLIIIDEEHDGSYKSGTTPRYHARQVAMHRCAEHGIPLVMGSATPSVEAWHLMQT
GAIARHTLTQRLAGGAQPEIEVVNLSEAGTADGCLSERLCAEIRRTLDEKRQTILFLNRR
GFTHFFRCNTCGYELTCKNCSVALTYHKHEKRLRCHYCGWLVEPPSLCPECGSVDVGYSG
FGTEFIEAETKAKFPQARVSRIDTDSLTKKGELQEKLAEFRNGEVDILLGTQMVAKGLNF
PNLKLVGVVLADTGLHMPDFRAAERTFALITQVAGRAGRFFPDGKVIVQSFSPDRDAIAR
ACKGDAAGFYAQELSQRQLLGFPPFCRMIRLVFRSAISETAQHAAEGAAVILAEEVRKLN
GTRLEASREPAHRTDGVQADATQIEILGPSECPLAMIAANYRWQVLLRGPSVSALQSVCA
RFIYGYKAPLHVYIEADVDPVSLL
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgatccgttacgttgaaaccgtgctgaacgtgccgcttccgcaaagtttcacgtatttg
gcggacggcgacacggcagaagccgttcggccgggaatgcgggctgaagtccgcttcggt
tcacggcggatgaccgcgttcatcgtgagtgtcgccgacgttccgcccgcgcatttagcg
gttcctgcggaaaaattgaaatacctcacccgcctgctcgacgcggaacccgttttcacc
gccgaacatatcgccctttcagcctggatcgcccgatattacctgtgcacgcagggagaa
gccatctccgcgatgattccgtccggaaaacgggaaaccgacagtccgggattttctttt
accgacgacgcaatcgaattcgaggcgcgcacgctttcggaagaacaaaaacgtgcggcg
gaaggtattttcgctccgggttcaaagctgcattacgtgtacggcccgacgggaaccggc
aaaacggaagtgtttttgcaggcggcgcagaaaatgctggacgaaggcaaaggcgtcatt
tatctggtccccgaaatcggcctcacccaccaagtcagggaagccgtcgtccgccgtttc
ggacacacggcggcggtgctgcattcggaattgacgccgagtcagcggctcaaacaatgg
aaacggatactcgaaaaagacgcgcgcgtcgttatcggcgcacgaagcgcggtttttgcg
cccgtacccgatctgggactcatcatcatagacgaagaacacgacggttcgtataaatcg
ggaaccactccgcggtatcacgcacggcaagtcgccatgcaccgctgtgcggaacacggt
ataccgcttgtcatgggaagcgcgacgccgtccgtagaagcgtggcatctgatgcaaacc
ggcgcaatcgcccggcatacgctcacgcagcgtctggcaggcggcgctcagcccgaaatc
gaagtggtcaatttgtcggaagcgggaacggccgacggctgtctgtcggagcggctgtgt
gcggaaatcagacggacgctcgacgaaaaacggcagacaatcctgtttttgaacagacgg
ggattcacccattttttcagatgcaatacgtgcggatacgagcttacctgcaaaaactgc
tcggtcgccctcacctaccacaagcacgaaaaacgcctgcgctgccattactgcggctgg
ttggtggagccgccgtcgttgtgtcccgaatgcggttccgtcgacgtcggttattcgggg
ttcggcacagaattcattgaagccgagacgaaagctaaatttccgcaggcgcgcgtcagc
agaatagacacggacagtttgacgaaaaagggcgaactgcaggaaaaactcgccgaattc
agaaacggtgaagtcgacatactgctcggcacgcagatggttgcgaaaggacttaatttt
ccgaatctgaagctggtaggcgtcgtgcttgccgatacgggactgcacatgcccgatttc
cgggcagccgaacggacgttcgcgctcatcacgcaggtcgccggccgcgcggggcgattt
tttcccgacggaaaggtcatcgtacaaagtttcagccccgaccgggacgcgatcgcgcgc
gcgtgtaagggagacgccgccggattttacgcacaggagctgtcccagcggcagctgctc
ggatttccgccgttttgccgaatgatacggctcgtgttcagatcggcgatttcagaaacg
gcacagcacgcagccgaaggagcggcggtcatcctcgccgaagaagtacggaaactgaac
ggaacccggctggaagcatcgcgggaacctgcgcaccggacggacggcgtgcaagccgac
gcgacacaaatcgaaatactcggcccgtccgaatgcccgctggcaatgattgcggcgaat
taccggtggcaagtgcttttgcgcggtccgtccgtaagcgcgctgcagagcgtctgcgcg
cgattcatctacggatacaaagcgccgctgcacgtgtacattgaagccgacgtagatccg
gtcagtttactgtaa
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