Trematomus bernacchii (emerald rockcod): 117482398
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Entry
117482398 CDS
T09643
Symbol
grin2bb
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04020
Calcium signaling pathway
tben04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117482398 (grin2bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117482398 (grin2bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117482398 (grin2bb)
Ion channels [BR:
tben04040
]
Ligand-gated channels
Glutamate (ionotropic)
117482398 (grin2bb)
BRITE hierarchy
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
117482398
NCBI-ProteinID:
XP_033986403
EnsemblRapid:
ENSTBNG00005025505
LinkDB
All DBs
Position
Unknown
AA seq
1745 aa
AA seq
DB search
MFKGRHLHSFTMLVSLHPSPSRLQDKHFVSPPSSTPPPPHPDQSSHHPYPQPRLTLPFLS
WSFSLLLFSILLLPVCESRRGGGPGSGPGGAQGGGGGQRGGGTQRGVVIPPQYSPAIPGL
PPINPKLINSLSIAVILVGNSSEVTLGAGLEKEDFLHIPYPPKVEVVTMNETDPKSIINR
ICAQMTRNSLQGVVFGDDTDQEAIAQILDFISAQTHIPILGIRGGSSMVMAAKDDNSMFF
QFGPSIEQQASVMLNIMEEYDWYIFSIVTTYYPGYQDFVNKVRSTIDNSFVGWELEEVFL
LDMSLEDGDSKIQNQLKKLQSPVILLYCTKEEASTIFEMAHSVGLTGYGFTWIVPSLVAG
DADIVPDVFPTGLISVAYDEWDYNIEARVRDAVAVIATATSTMMLDRGPHTLQKSSCLGT
PDKKGSNTGHSKEILKYLMNVTFEGRNLSFSEKGHQMFPKLVIILLDKDRQWDRVGKWER
GSLTMRYHVWPRFEEEREDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQLKLTNQ
TGDSGIYIKRCCKGFCIDILKKIAKAVKFTYDLYLVTNGKHGKKVNGTWNGMVGEVVLKN
AHMAVGSLTINEERSQVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVM
LLLVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKG
TTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGLSDKKFQNPNEFSPPFRFGT
VPNGSTERNIRNNYRDMHTYMTSFHQKNVDEALYSLKSGKLDAFIYDAAVLNYMAGRDEG
CKLVTIGSGKVFASTGYGIAIQKDSGWKRAVDLAILMLFGDGDMEEFEALWLTGICHNEK
NEVMSSQLDVDNMAGVFYMLGAAMILSLLTFICEHWFYWQLRFCFMGVCTGQPAATFTIS
RGIWSCIHGVQIEENKSTIDSPSATMKKNMNNTHSNILRLLRTAKDMTAVPGANGSPHPA
LEYSHSARESTIYDMQEHRRSLVGHPADCKTAPPYLPEDNMFSDYISEVERTFGNLPLKD
SNLYQDHYLHHHPASALGMSGPAPNRPRSLGSTSSLEGGMFDCDSLGGGVAPIFTTQPRP
SMTHRNTNKFDLIAGHAPADSDQGGFKGNNVYGRFSFKGGASSTGLIGGHDRYCGGGGAG
SGGDDGNIRSDVSDISTHTVTYGNLEGNNKRRKQYRDSLKKRPASAKCRREQDEIELSGL
RRRAHHHTVHHHFPHGPQAHRTVSPPLERKRGGGGGNSSPFVFRKEKENLRDFYADQFRS
KEGKAQWEHEGGSGGSGVGGGSGGGICKSLVPVEDFLKGKGKKPECKGGLGTVSAGQQAH
TCWEKGVSGLGGGGIAGGDWECRNSHNVCHHGGGGACPANGVGGSSSRPSSASCKRGDSC
KVPPGNLYNISEDNNMVFAARKSSVGPAQPQTQAQRRKLGPGGRVLRRQHSYDTFVDLQR
EGTGRMGGVGGGVGGPYAQPRSVSLKDKDRSMEGPSPYAHMFERYAGESSMFGGIGGDRA
KGGSSFSLFREGGLHQRSVGERDLRDRDRAMSGGGGGSRGAGTYSLSKSLYPDKVNQNPF
IPTFDDDQCLLHGGKPYYIKKPQTQQQQQQLLNNSRGGGDFRGSMGTTSYLPASATAGVM
SNVAPRFPNDLCLGGVGGPMGNHHGASKLMPVARDTLGLGPGHRPFNGASNGHVYEKLSS
IESDV
NT seq
5238 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagggacggcatttacactccttcacaatgcttgtcagcctccacccttctccc
tcccgtcttcaggacaagcactttgtctcccccccttcctccaccccccctcctcctcac
ccagaccagtcctctcatcatccttatccccagcctcggctgaccctgcccttcctctcc
tggtccttctctctgctcctcttctccattcttctgctgcccgtctgcgagtcccgcagg
ggtggaggtccaggttcggggcctggaggtgcccaaggggggggaggcggccagagggga
ggcggcacccagagaggggtagtcatcccgcctcaatactctccagcgataccgggtctt
ccccccatcaaccccaaactgatcaactctctcagcatagcggtcatcctggtgggaaac
tctagtgaagtaactctgggggcggggcttgagaaagaggacttcctgcacatcccttac
cctcccaaagtggaggtggtcaccatgaacgagaccgaccccaagagcatcatcaatcgg
atctgtgctcagatgacgaggaactctctgcagggcgtggtgttcggtgacgacacggac
caggaggccatcgctcagatcctcgacttcatctcggcccagacacacatccccatcctg
ggcatccgcgggggctcctccatggtcatggctgccaaggacgacaactccatgtttttc
cagttcggtccgtccatcgagcagcaggcctccgtcatgttgaacatcatggaggagtat
gactggtacatcttctccattgtcaccacatactaccctggctaccaggactttgtcaac
aaggtccgaagcaccatcgataacagctttgtgggctgggagctggaagaagtcttcttg
ctggacatgtcattggaagacggagactccaagatccagaaccagctgaagaaactgcag
agtccggtgatcctgctctactgcaccaaggaggaggccagcaccatctttgagatggct
cactctgtgggcctcacagggtacggcttcacctggatcgtgccctcgctggtggctgga
gacgcagacatcgtccccgatgtcttccccacagggcttatctctgtggcatatgacgaa
tgggactacaacatcgaggccagggtacgtgatgcagtggctgtcatagccacggcgacc
tccaccatgatgctggaccgggggccgcacaccctgcagaagtccagctgcctcgggact
ccggacaaaaagggctccaacactggccactccaaggaaatactgaagtacctcatgaat
gtgacatttgaaggcagaaacctgtcatttagcgaaaagggtcaccagatgtttcccaaa
ctggtcatcattcttctcgacaaggacagacaatgggacagggttggcaagtgggagaga
ggctccctgacgatgaggtaccatgtgtggcctcgcttcgaggaggagcgggaggaccac
ctgtccatcgtgactctggaggaggcgccgtttgtgattgtagaggacgtggacccgctc
agtgggacctgcatgaggaacactgtgccgtgccgaaaacagctcaaactaaccaatcag
acgggggattcggggatttacatcaagcgctgctgcaaaggtttctgtatcgacatccta
aagaagatcgccaaggcggtcaagttcacctacgacctctacctggtcaccaacggcaaa
catggcaagaaggttaatgggacatggaatggcatggttggggaggtggtgttgaagaat
gctcacatggcagtgggttcgctcactattaacgaggagaggtcacaggtcatcgacttc
tctgtgcctttcattgagacgggcatcagtgtcatggtctcccgtagcaacggcaccgtg
tccccctccgcctttctcgagcccttcagtgctgatgtctgggtgatgatgtttgtgatg
ttgctgttggtgtcggccgtggctgtgtttgtgtttgaatacttcagcccagtgggttac
aatcgctgcctggcagatgggcgagagcccggcggtccctccttcaccatcggaaaggcc
atctggttgctatggggtctggttttcaacaactccgtccccgtgcagaaccccaaaggt
accaccagtaagatcatggtgtcagtgtgggccttcttcgctgtcatcttcctggcctcc
tacactgccaacctggccgccttcatgatccaagaggagtatgtggaccaggtgtcgggc
ctgtcagataaaaagttccagaatccaaacgaattctcaccgccgttccggttcggcacg
gtgcccaacgggagcacagagcgcaacatccgcaacaactaccgggacatgcacacttac
atgaccagcttccaccagaagaacgtagacgaagcgctgtacagtctgaagagcggcaaa
ctggatgccttcatctacgacgctgcggtgctgaactacatggcgggccgagacgaaggc
tgtaagctggtcaccatcggcagcggcaaggtgtttgcctccaccggctacggcatcgcc
atccagaaagactccggctggaaacgagccgtggatctggccatcctcatgctgtttgga
gacggtgacatggaggagtttgaggctctgtggctgacgggcatctgccacaatgagaag
aacgaggtgatgagcagccagttggacgtggacaacatggcgggcgtcttctacatgctc
ggggccgccatgattctgtcattactcactttcatctgtgaacattggttctactggcag
ctgcgtttctgcttcatgggcgtgtgcacgggacagcccgcggccaccttcaccattagc
agaggtatctggagctgcatccacggggtacaaattgaggaaaacaagtcaaccattgac
tcgccctcagccaccatgaagaagaacatgaacaacacccactccaacatcctgcggctg
ctccgcacggctaaggacatgactgccgtcccgggcgctaacggctctccacacccggcg
ctggagtacagccacagcgcgcgtgaatcgactatctatgatatgcaggagcaccggcgc
agcttggtaggtcaccctgccgactgcaagacagcgcctccctacctgccagaggacaac
atgttcagtgactacatcagcgaggtggagaggacttttgggaacttgcccctgaaggac
agcaacctgtaccaggaccattacctgcaccaccacccggcctcggctctgggtatgtcc
ggccccgcgcctaacaggccgcgtagcttaggcagcactagctcgttggaaggtggcatg
tttgattgcgacagtttagggggaggggtagcgcccatcttcaccacccagccccgccca
tccatgactcacaggaataccaataagttcgacctgattgccggccacgcccctgcggac
tccgaccagggtgggttcaaggggaacaatgtgtacgggaggttttctttcaaaggaggc
gcatccagcacggggctcatcgggggtcatgaccggtactgtggtgggggtggggcaggc
tcagggggggatgatgggaacattcgctcagacgtttcggatatctcaacgcacactgtc
acctacggcaacctggagggcaacaacaagcggcgtaagcagtacagggacagcctgaaa
aagaggccagcttcggccaagtgcagacgggagcaggacgagatagagctgagcggcctc
aggaggagagcccaccaccacaccgtccaccaccacttcccccacgggcctcaggcacac
cgcacggtctcacctcccctggagcggaagagaggaggaggagggggtaattcttcacct
ttcgtattccgcaaagaaaaggagaacctgagggatttctatgcggaccagttccgctcc
aaggagggcaaggcccagtgggagcacgagggtggaagtggaggaagcggtgtgggcggt
ggtagtggtggtggtatctgtaagagcttagttcctgtagaagacttcctcaaaggtaaa
ggcaagaagccggagtgtaaaggtgggctcggcacagtgtcggcagggcagcaggcccac
acctgctgggagaagggggtctctgggctaggaggggggggcatagcagggggtgactgg
gagtgtcgtaatagccacaatgtgtgtcaccacggagggggtggcgcttgcccggctaac
ggggttggggggagcagcagtcgccccagctccgctagctgcaaacgcggcgactcctgt
aaggtcccgccgggaaacctttacaacatcagcgaggacaacaacatggtgttcgctgca
aggaagagtagcgtgggaccggcccaacctcaaactcaggcgcagcgcaggaagctaggg
ccaggggggagggtgttacggaggcagcactcgtatgacacatttgtggacctgcagagg
gaggggacgggtcgcatgggaggggttggcggaggcgttggggggccttatgcccagcct
cggagtgtgagcttaaaagacaaagatcgctccatggagggccccagcccttacgctcac
atgtttgagaggtatgcaggggagtcttccatgttcggaggaataggcggggatagggcg
aagggaggctcgtccttcagcttgttccgagaaggtgggttgcatcagcggtcggtgggg
gagagagacctgagggacagagatagagctatgtcaggaggtggtggtggcagcagaggg
gccgggacttactccttgtctaaatctctctacccagataaggtgaaccagaaccccttc
atcccaaccttcgacgacgaccagtgtctattacacggcggcaaaccgtactacatcaaa
aagccacagacgcagcaacagcagcagcaacttctcaacaacagccggggaggaggggac
ttccgcggctccatgggaacgacttcctatttgcccgcgtccgccacagctggggtgatg
tccaatgtggcccccaggttccccaacgatctgtgtctgggcggggtaggggggcccatg
gggaaccaccacggggccagcaagctaatgcctgtggccagggacactttgggtttgggg
ccggggcatagacccttcaacggtgccagcaatggacacgtttatgaaaagctctccagc
attgagtcagacgtctga
DBGET
integrated database retrieval system
