Trematomus bernacchii (emerald rockcod): 117485364
Help
Entry
117485364 CDS
T09643
Name
(RefSeq) gastrula zinc finger protein XlCGF57.1-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117485364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117485364
Transcription factors [BR:
tben03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
117485364
BRITE hierarchy
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-met
zf-C2H2_jaz
zf-C2H2_6
BolA
DUF4764
zf-C2H2_11
zf-H2C2_5
zf-C2H2_2
C1_4
Motif
Other DBs
NCBI-GeneID:
117485364
NCBI-ProteinID:
XP_033989768
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MSVVLLSLVKQRLTAAAEDIFVLFERTIAEYEEELSRSKQENERHRKLLDAVLQPQLQIH
RADVQQLVVVKEEVPPEQQEWRSSLDQEDPEPPPHIKEEQEEHWSSQEGEQLQGLEEADI
TKSTFTPVPVKSEDDEEEPQSSQLHQRQTEHLETEADGEDCGGPEPARNSDPERHLQPET
EDNPGDSSEDSADWKETREPGSNSQVNKEDPVSDSRRSAGEKRFSCSVCEKTFARKGSLH
RHMRNHTGEKPFSCSVCEKSFAVKGSLHRHMRIHTGKKPFSCSVCEKSFAQKGSLHRHMR
IHTGKKSFSCSVCEKSFKQIGQLNEHTKIHTGEKPLSCSVCERYFAGRGNLNRHMAIHTG
EKPFSCSVCEKTFPRKESLHRHMRNHTGEKPFGCSVCNKSFTHRGSLKCHMRNHTGEKPF
SCSVCKKYFTQKRHLRTHRRIHTGEKPYRCSVCDKRFTWSCQVKIHKCVGRQSSQLHQTQ
TEENREAEPPASSSAEHLETEAYGEDSGGPEPARNSDPERHLQPETEDNPGDSSEPDIFQ
VKSYLADWKPVY
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttgtgctgctctcgttggtgaagcagcgactcactgcggctgctgaagacatc
tttgttctgtttgaaagaacgatagcagagtacgaggaggaactgtctcgttcaaaacag
gagaacgagagacaccggaaactactggacgctgttttacagcctcagcttcagatccac
agagcagacgtccagcagctggtggtggttaaagaagaggttccccctgagcagcaggag
tggaggtccagtctggaccaggaggacccagagccccccccacacattaaagaggaacag
gaggaacactggagcagtcaggagggagagcagcttcaagggctggaggaggctgatatc
accaagtccacattcactcctgtccctgtgaagagtgaagatgatgaagaggaacctcag
tcctctcagcttcatcaaagacaaactgaacacctggaaacagaagctgatggagaggac
tgtggaggaccagaaccagccaggaactcagatccagagagacatttacaacctgagact
gaggacaaccctggagactcttctgaagacagtgctgattggaaggagaccagagaacca
ggatcaaactctcaagtaaataaagaagaccctgtcagtgattcaagacgtagtgcagga
gagaaacgattcagctgctcagtctgtgagaaaacatttgcacggaaaggatctttacat
cgacacatgagaaaccacacaggagagaaaccattcagctgctcagtctgtgagaaatct
tttgcagtgaaaggatctttacatcgacacatgagaatacacacaggaaagaaaccattc
agctgctcagtctgtgagaaatcttttgcacagaaaggatctttacatcgacacatgaga
atacacacaggaaagaaatcattcagctgctcagtctgtgagaaatcttttaaacaaata
ggacaattaaatgaacacacgaaaatccatacaggagagaaaccactcagctgctcagtc
tgtgagagatattttgcagggagaggaaatttaaatcggcacatggcaatacacacagga
gagaaaccgttcagctgctcagtctgtgagaaaacattcccacggaaagaatctttacat
cgacacatgagaaaccacacaggagagaaaccattcggctgctcagtctgtaataaatct
tttacacataggggaagtttaaagtgccacatgagaaaccacacaggagagaaaccattc
agctgctcagtctgtaagaaatattttacacaaaagagacatttaaggacacacagaaga
atccacacaggagagaaaccatacagatgcagtgtctgtgacaaaagattcacctggagt
tgtcaggtcaaaatccataagtgtgttggtcgtcagtcctcacagcttcatcaaactcag
actgaggagaacagagaggcagagcctccagccagcagctcagctgaacacctggaaaca
gaagcttatggagaggactctgggggaccagaaccagccaggaactcagatccagagaga
catttacaaccagagactgaggacaaccctggagactcttctgaacctgacattttccaa
gtcaaatcttatttggcagactggaagccagtgtattga
DBGET
integrated database retrieval system
