Trematomus bernacchii (emerald rockcod): 117493494
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Entry
117493494 CDS
T09643
Symbol
nhsl1b
Name
(RefSeq) NHS-like protein 1 isoform X1
KO
K24144
Nance-Horan syndrome protein and NHS-like proteins
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117493494 (nhsl1b)
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
117493494 (nhsl1b)
BRITE hierarchy
Motif
Pfam:
NHS
Motif
Other DBs
NCBI-GeneID:
117493494
NCBI-ProteinID:
XP_033999960
EnsemblRapid:
ENSTBNG00005010650
LinkDB
All DBs
Position
Unknown
AA seq
1762 aa
AA seq
DB search
MPFHQRSIEPRRVSRLSPCDGWIPREENGKGKLRKPVLFSSLDEVGCHTLVNIIHQLSDL
SRHASDIFLAIEMEAGMVFRRSCRIQGRLQRLQGEIRQFDPKKVTIPVSNLDEESKWTVH
YTAPWHQQENVFLPGSRPPAVEDLHRQAKVNLKSALRECDKLRKDGFRSSQYYSQGPTFS
DPLQSNSSLQDEEEDDKKSTASSAEDDKSQLSMRPQTPQEGVEGEEGYEVDGKIVWNKGA
PLPTPEQKMRLAAQAVATDIVAINVTGAVFDRQATVRRSLINSDTVSRRPKKVKRRKTIS
GLPDNFNHELAKGDLRPHSMFIPGQYSTLGRVGSVNSTLRHSITRDSGCQTENVKVVPPS
MRRIRAQRGQGIAAQMAGISASSSTGSISISSSDSSGIMMLPQYNRDLSRFHSLPRPGAR
VSLSADPIYSSTPIKSEEQTTPQRQIGRLRVDDTVVHMRNAPRTATLPRPKSQELRGAKA
SDWGGGPACVVSPHAAYSTSLLPNATMSSSSEVIMLNTSGPSPSSSYPTARPLSLASTNT
DPMSPSPTSFTHSSTCPALATSTPTHPPRDGGLVVAAPASDLGHSDSSIHSRSTLAPTPP
SGLPEEQWIYDTPENMVIPHRTLTSSCSTPINQLYGSLDHSSRTTTDSSSLYSQDNDGYY
TSMHMDSGLRSRSHGSGHGAAPARATRHSMYECREMANQEDTGSLYSDRSLSRSISLRKP
KKPPLPPARTDSLRRKTSVKKPLGGVSAISGAKDSNGAMLNETLIASLQQSLQMGLRGGK
GIGASPSSPSHSPCSDYDDPWVLRPRSQSSTSACSSAASLVANANCGGVSSVYSLCHVTP
AQSDTSSLRSDYADSWGYYMDYPRNQGDQRAHSPQAHGANNMSAEAHPGELHNGGEILNS
SQAPGAPGQEGGVAAKPKMSTSSPDRVHRLTSPSSGYSSQSNTPTAGTPVPSFVRSMSPS
GTRPRPRVPERKSSLLSSVSMSSSSTSLSSNTSDSIKSFGPPPPPPPPLPLLSSSAPTTP
LSPPPAFPPPLPPSSIAGPPPPPSPPLPTTPQGQTQSPPPACSTSPDFPPPPSPDTLFPS
SSSFNGSFSPPPPPPPPIPPMGPPPPPPPPLPACVPSFSSPGFAKAVKDAPKAALSNSPT
KSPNPLITPFALQSVQLRSVRRPEKEINGTSGHTKAQGTGPDLLQGLKPLQKSQSLEHPT
MIHLSNGSLEDDDSRNSSPSPVSKLLEDFPFDFSITDDTTDSAVVNGRSEDQSDFVLHRR
EKAEEQNVLPSPPQSPESSPVKQKPPVVSKKPNMSFLHQFSPQQIIEQIPSQHEGPTGPL
QTEDQVDALRRQMKEDIKSEQQAEEDTSEISEVQAKSRETSPTITQEERTPAAAGQSSPD
HAVYTNGAAHEEDEDEEEGDGTSSTTGSVSSKEDDTGEVFFSSTAESSPVPPANGASEEK
MVTPTPTRPRTTEDLFAAIHRSKRKVLGRKETEEDKSRAGSQPQSPPATPTGGSPVMGSP
SPGMVSPGMASPVMASPGMASPVMASPGMASPGMASPGMASPVMASPGMASPGMASPGMA
SPVMASPAMMSPGSTSSLPRQTGSIQRNLRKSSTSSDTFKALLLKKGSRSESSFRMSATE
MLRSTGPRTQRTYSESALDSPAASPSSLGSPNSPCSSPGRGKRATDEWSRYDAFSLSSPT
ASTYSMSGFKYGRSRTPPSAASSKYNARNRMLSSPMTVICEREGELAESEYGDPAESLSG
PSAQTRAVLNNSNGTLSGESRS
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atgccctttcatcagaggagcattgagccgcggcgtgttagccggttatcgccgtgtgat
ggctggataccgagggaagaaaacgggaaaggcaaactgcgaaaacccgttttgttctct
tcattggatgaggttggctgtcatacacttgtaaacattattcaccaactttccgacctt
tctcgacatgccagcgacatcttcctggccatcgagatggaggcaggcatggtgttcaga
agatcctgcaggattcaggggagactgcaaaggctgcagggagaaatccgccagtttgat
cccaagaaagtcacaatccctgtgtctaacctggatgaggagagcaagtggacggtgcat
tacacagctccgtggcaccagcaggagaacgtcttcctgccaggcagccggccccccgcc
gtagaagacctccaccgccaggccaaagtcaacctgaagagcgccctgcgagaatgcgac
aagttgaggaaagatggattcaggagctctcagtactactctcagggtcccaccttctct
gaccccttacagtccaacagcagcctgcaggatgaagaggaggatgataagaagtccaca
gcatcatcagcggaggacgacaaatctcagctgtccatgaggccccagaccccccaggaa
ggcgttgagggagaggaggggtacgaggttgacggaaagattgtatggaacaagggcgca
cccctccccaccccggagcagaagatgaggctggcggctcaggccgtagccacagacatc
gttgctatcaacgtcacaggggccgtgtttgaccggcaggccaccgtccgacgctccctc
attaactcggacaccgtgtcccgccggcccaagaaggtcaaacgcagaaagactatatca
gggctgcctgacaacttcaaccatgagctagcaaaaggagatctccgaccgcattccatg
ttcatcccgggacagtactccaccttgggcagagttgggagcgtcaactccacgctccgc
cattcgatcaccagagactccggctgccagacagaaaacgtgaaggttgtgcccccgtcc
atgaggaggatccgggctcagagaggacaggggatcgcggctcaaatggccggcatttct
gcttcctcctcaacaggaagtatatccatctcgagcagtgacagctcggggatcatgatg
ctgccgcagtacaacagagatctttcccgttttcacagtctgcctcgaccgggggccaga
gtgtctctcagtgctgaccccatctatagcagcacccccatcaagtcagaggagcaaact
acgcctcagaggcagattgggaggctgcgggttgacgacacagtggtgcacatgagaaat
gccccaaggacagccacccttccccggcccaagtctcaggagctgaggggggcgaaagcc
agtgattgggggggtggcccggcatgtgtggtctccccacatgctgcctattccacctcc
ctcctccccaacgccacaatgtccagctcctctgaggtcattatgctcaacacctctggt
ccctccccttcctcatcttaccccacagctcgtccgctcagtctggcctccaccaacaca
gaccccatgagccccagcccaacatcttttacccacagttccacctgcccagccttggcc
acctcgacccccactcacccaccaagggatggcggtctggtggtcgcagcacctgccagc
gacttggggcactctgacagcagtatacacagccgcagcaccttggcgcccacgccgccc
tccggactgcccgaggaacagtggatctacgacacgccagaaaacatggtgattccacac
cgcaccttgacctccagctgctccactcccataaaccagctgtacggcagcctggaccac
tcctccaggactactactgactccagctccctctattcccaagacaatgacggatactac
acctccatgcacatggactcaggcctgcgctctcgcagccatggcagtgggcacggagcg
gcgcctgcacgggccaccaggcacagcatgtacgagtgccgggagatggccaatcaggaa
gacactggaagcttgtacagtgatcgctcgctgtcacggagcatctcactccgcaagccc
aagaagcctccgctgcctccagcacgcacagactctctcagacgtaagacctctgtgaaa
aagcccctcggaggcgtaagcgccatcagcggtgctaaggattcaaacggagccatgctc
aatgagactctaattgccagcttgcagcagagcctgcagatggggctgagaggggggaag
gggataggggcttcaccttcctcgccctctcacagcccatgcagcgactacgatgaccct
tgggtgcttcggccacgcagtcagagtagcaccagtgcatgtagctccgcagcgtcactt
gtagctaatgccaactgtggcggcgtgtctagcgtgtattcgctctgccatgtgacgcct
gctcaaagcgacaccagcagcttgcgctcagactatgctgattcctggggctactacatg
gactacccgcgtaaccaaggagaccagagggcccactcccctcaggctcatggcgcaaac
aacatgtcggccgaggctcaccccggagagttacacaatggaggtgagatcctcaacagc
agccaggcgcctggagctccagggcaggagggaggcgtggcagccaagcccaaaatgtcc
acctcctccccggaccgggtgcacagactgacctcgccgtccagcggctactccagccag
tccaacacccccacagctgggacccccgtcccctcgttcgtcaggtccatgtctccatcg
gggacccggcccaggccccgggtgcccgagaggaagtcctctctcctctcctctgtgtcc
atgtcctcctcttccacctccctgtcctccaacacctccgactctatcaaaagcttcgga
cctcctcccccaccacctccacccttgccactcctctcctcctcagctcccaccacccct
ctgagcccacctccagcctttcctccccctctaccgccaagctccatcgcaggccctcct
cctcctccatctcccccgttgccaaccactccccagggtcaaacacagagcccaccccct
gcttgctccacctccccagatttccctcctcctccatcccctgatacactattcccctcc
agttcatccttcaatgggagcttcagccctccccctccacctcccccgcctatcccccct
atggggccccctccacctcctcctcctccattgcctgcttgtgtcccatcgttctcctcc
ccaggctttgctaaggcagtgaaggatgctcctaaagcagctctctccaacagccctaca
aagtcacctaatcccctgatcaccccgtttgcgctgcagagcgttcagctccgctctgtc
aggcggccagagaaggagattaacggcacgtcaggccacaccaaagctcagggaacgggg
ccggacctccttcagggtctcaagcccctacagaagtctcagtctctggagcatcccact
atgatacacctgtcaaacggctccctagaagacgacgactctcgtaactcctcaccatcc
cctgtctcaaagctcttagaagacttcccttttgacttcagtatcacagacgacacgaca
gatagtgcggtcgtaaatgggagatctgaggatcagagtgactttgttttacacagaaga
gaaaaagcagaagaacagaatgtattgccaagccccccacagagccctgaaagctcccct
gtcaaacagaagcccccagtagtctccaagaaacccaacatgtcttttctccaccaattt
agcccccaacaaatcattgaacagattccatctcagcatgagggtccaaccggcccgtta
cagacagaagaccaagtggatgcgctgcgaagacaaatgaaagaagatatcaaaagtgag
caacaggcggaagaggacacttcggagatctccgaggttcaagctaagagccgtgaaaca
tctcccacaataacccaggaggagcgcacacctgctgctgccggccaatcaagtcccgac
cacgcagtgtataccaatggagcggctcatgaagaggacgaggacgaggaggagggagat
ggaacaagtagcacgactggatccgtcagctccaaggaggacgacacaggtgaggtgttc
ttctccagcacggctgaatcgtctccggtcccgcccgccaacggggcctctgaggagaaa
atggtgaccccgactcccacccggccccggaccaccgaggacctttttgccgccattcac
aggtcgaagcggaaggtcctgggacgcaaggagacggaggaggacaagtcccgggctggg
agccaaccccagtctccaccggccaccccaactgggggctccccagtgatggggtccccg
tccccgggcatggtgtcccctggcatggcgtccccggtcatggcgtccccgggcatggcg
tccccagtcatggcgtccccgggcatggcgtccccgggcatggcgtccccgggcatggcg
tccccggtcatggcgtccccgggcatggcgtccccgggcatggcgtccccgggcatggcg
tccccggtcatggcgtccccggccatgatgtccccgggctcgacgtcctccttgccccgc
cagacaggctccatccagcgcaacctccgcaagtcctccaccagcagcgacaccttcaag
gccctcctcctgaagaagggcagccgctcagagagcagcttcaggatgtcggccacggag
atgcttcgctccaccggccctcgcacccagcgaacatactccgagtcagcgttggactct
cctgctgcttctccctcgtcactggggtccccaaacagcccctgcagctccccaggccgc
gggaagagggcaacagatgagtggagccgctacgacgcgttctccctgtcctcgccgacg
gcatcgacctattcaatgagcgggttcaagtacgggcgctcccgcacgccgccttctgcc
gccagcagcaagtacaacgcccgcaaccgaatgctcagcagcccaatgacagtcatctgt
gagcgggagggggagctggctgagagcgagtacggagaccctgcagaaagtctgtccgga
ccctcggctcagacccgggctgtactcaataactccaatggcactttatctggagagagc
agaagttaa
DBGET
integrated database retrieval system