Trematomus bernacchii (emerald rockcod): 117494043
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Entry
117494043 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: la-related protein 4
KO
K18763
la-related protein 4
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117494043
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
117494043
BRITE hierarchy
Motif
Pfam:
La
HP0268
Se_S_carrier
SET_assoc
Motif
Other DBs
NCBI-GeneID:
117494043
NCBI-ProteinID:
XP_034000579
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MSSDQSGEPPLLQEDPGPETGGKDEAPLGSDGGSGGMVTSKGAGLNPNAKVWQEMPVAPS
EAVTNSPHWPPADISEGYSEPSSAGCKPFTVGFTALDDSSSSATAEIAVNGMDPPELGVS
PAESTTGIPADSKTEEPPQISSENLRESLKKELEFYFSRENLSKDLYLMSQMDSDQFVPI
WTIASMEGIKVLTTDMDLILDVLRSSPMVQVDEKGEKVRPNHKRCIIILREVPETTPVEE
VEALFKNDNCPKVISVEFAHNNNWYITFQSDTDAQQAYKYLREEVKTFQGKPIMARIKAI
NTFFAKNGYRSMDSSLYAQQSQIQSQYSSPLYMQHVYPQQQYPVYGIVPPTWTASPTPYF
ETPLAPFPNSSFVNGFGSAGHYKTGSNSLNITRPFNRNRVPLYSRKNVINAFRNHVKPQV
RTGEVTSASVTPVPLESLTGLRSPQPPAPLATLPVQAASDLSSAFSHLSSSSSSLDPSDD
SGMAGRGRRSTTYRGTRRRREDDRIARPVPLAEIKVSQPKFDLAATNFPPLPGCVVSTQG
EPVLENRMSDVVRGLYRDKTEQANKEATVSPASGPTPVTEEAVAVSSPALPAAKPAALPL
GPPVSGIPRQEKRVERAEPLAPKVAPRTPVQTTVIPPPTTQPVPNPRPQPPAAAAASVAA
AAAPLAAAPVTSTPATPSTPAPAAAPPPPSATQEPRKLSYAEVCQRPPKDPPPAAPAPVS
TGTASGQPLRELRVNKAEDQGSGSVAGDKQEKVHDREGGWECKESRPPRDRDSQGYYRSN
GPRGNGGLKFREQRRPPPARRSSPQGGYRHTGKEQNIPPVSPK
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagaccagagcggagagccgccgctgctgcaggaggaccccggaccggagacc
ggtgggaaggacgaggctccgctggggagcgacggagggtcaggcggcatggtcacctct
aagggtgccggtttgaacccaaatgccaaagtgtggcaggagatgcccgtggcccccagc
gaggctgttaccaacagccctcattggccccccgcagacatcagtgagggttattctgag
ccttcgtctgcggggtgtaagccgttcaccgtgggattcacggccctggatgacagcagc
tcctcggcaacagctgagatagcagtaaatggaatggaccctccagagttgggcgtttcc
cccgccgagtccaccacggggatcccagcagattctaaaactgaagagccgcctcagatc
tcctctgagaatctacgagagtctctgaagaaggagctggagttttacttctccagagag
aacctctcaaaggatttgtacctgatgtcccagatggacagtgaccagtttgtccccatt
tggactattgccagcatggagggcatcaaggtcctcaccactgacatggacctcatcctg
gatgtgttgagatcctctcctatggtacaagtggatgagaaaggggagaaagtgcgtcca
aatcacaagcggtgcattatcattctcagggaggtacctgaaaccactcctgttgaggaa
gtggaggcactgttcaaaaatgacaactgtccaaaagtgatcagtgttgagtttgcgcac
aacaacaactggtacatcacattccaatcagacaccgacgctcagcaggcatacaagtat
ttgagagaggaagtaaaaacatttcagggaaaacccattatggccaggataaaggccatc
aacacattctttgcaaagaatggctaccgtagcatggacagcagcctgtacgcacagcag
tcccagatccagtcccagtacagctctccgctctacatgcagcacgtctacccccagcag
cagtacccggtctacggcatcgtacctcccacctggacggcttcgcccacaccgtacttt
gaaactcctctggccccgtttcccaacagtagctttgtgaatggatttggctcagccgga
cactacaaaactggctccaattctcttaatatcactcgcccattcaacagaaaccgtgtc
cccctctattcaagaaagaatgtaataaatgccttcaggaaccatgtgaagccccaggtg
aggacaggtgaggtgacctcagcgtcagtaacccctgtccccctggagagtctgactgga
ctgcgcagcccccagccccctgctcccctcgccaccctgccggtccaggccgcctctgac
ctgagctccgcgttctcacatctttcctcctcttcctcgtctttggatcccagtgatgac
agcggcatggctggacgtggaagacggagcacaacctaccgaggaacacggaggaggcga
gaagatgaccggattgcgaggcctgtaccgctagcagagatcaaggtttctcaaccgaag
tttgacttggccgctaccaatttcccaccacttcctggctgcgtggtcagcacacaggga
gagccagtgctggagaaccgaatgtcggatgttgtacgcgggttgtacagggacaagaca
gaacaagccaataaagaagccactgtgagtccagcttcaggccccaccccagtcacagag
gaggctgtggcggtctccagtcctgccctgccagcagccaaacctgctgcactcccactc
ggacccccggtctctggtatccctcgccaggagaagagggttgaacgggcggagcctcta
gctccaaaagtggctccacgcacgccagttcaaactaccgtaatcccaccccccaccaca
caacctgtgcctaaccccaggcctcagccccctgctgctgctgctgcttctgttgcggct
gctgctgctcctcttgctgctgcccccgtcacctccacaccagcgactccaagcacgccg
gctcctgctgcggccccccctcctcccagcgccacacaggagccacgcaagctcagctac
gccgaggtgtgccaacggccacccaaggaccctccacctgcggcccctgccccagtttcc
acaggcacagcgtctggccagccgctacgcgagttgcgcgtgaacaaagctgaggatcag
ggctccggcagcgttgctggagacaagcaggagaaggtccatgacagggagggggggtgg
gaatgcaaggagagccgacctccacgtgatcgtgactctcaaggctactaccgcagcaac
ggccccagaggcaacgggggcctcaagtttcgggaacagaggcgcccgcctccagcccga
cgcagctctccgcagggaggctacaggcacactggcaaagagcagaatatccctccagta
tcgccaaagtaa
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