Trematomus bernacchii (emerald rockcod): 117494153
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Entry
117494153 CDS
T09643
Symbol
usp19
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 19 isoform X1
KO
K11847
ubiquitin carboxyl-terminal hydrolase 19 [EC:
3.4.19.12
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117494153 (usp19)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117494153 (usp19)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117494153 (usp19)
Peptidases and inhibitors [BR:
tben01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117494153 (usp19)
Ubiquitin system [BR:
tben04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117494153 (usp19)
BRITE hierarchy
Motif
Pfam:
UCH
USP19_linker
UCH_1
CS
zf-MYND
USP7_C2
Motif
Other DBs
NCBI-GeneID:
117494153
NCBI-ProteinID:
XP_034000774
EnsemblRapid:
ENSTBNG00005023747
LinkDB
All DBs
Position
Unknown
AA seq
1567 aa
AA seq
DB search
MASSGGSGVAGSETVGRRGGAQQRGGGVRENSSDLSSSTSKKKQKDRANQESREAKRAAA
AAVDGVIAEVKKDVFVDWKQNVNEVTVRLRCGEGVQRIEDINTTFTDTHCHVHFPDGRQW
SCQLQEEIEASCSRVQHKEKGGFLHVIMHKKIPFHIWPSLKSNKKEKETVPIEIKKEKEL
EGKPVASESSEKPKVSSTQPNQQPPSTPAHSESRRGGSKAERGVKRGLKNKQACDKTTTD
SAGVKGGDSSAPTSKPVAVTQGEPQEPSAKRTITQLPAATKEATSPADRDAHTHLPAGRS
PQTQRRDGDNKGGGEEQRAGVAAGSHTNKTQVAEKRNHSSERSGTAAHSSDDQPAAPVST
VNGLQTDNQLPVGFNKEVNSASPEMQGDRTDSELQKKPVEQESEQDTLIRQQQQQLESKE
AGSIPAVGMAAKQSQSPAVAQRQGSCDGEEKQDQSKEEPPLEIKQQEVPEPMVNLQILKY
DSYEKGTDLMVVNVYTKGICRDTARVIFREQDFTLIFQTSDTNFLKLHPDCGPNTVFKWQ
VKLRNLIQPEQCSYSFTPSRLDISLKKRHSQRWGGLEAPATQGAVGGAKVAVPSSPSCME
KSQPGSSQHNHPAMEEPPRVGEEKPKPPKALSRMDDGGLDNVAPRSVSEHVPISKPELAV
TTPKPTCMVQPMTHATPASNERHEEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNSRE
LRDYFHDRGFESEINCNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQ
FTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTETVDSDGRLDEVVAEEAWQRHKMRNDS
FIVDLFQGQFKSKLVCPMCSKVSITFDPFLYLPVPLPQKQKVLSVFYFAKEPHKKPIKFL
VSVSKENSSTAEVLESISRNVRVKPENLRLAEVGKNRFQRMFLRSHSLDTVSSSDMLFCF
EVLSKDMAKERVVLLRVQQRLQVPNIPISKCAACLKPPVCDDDKLKRCTRCYRVGYCNQD
CQKTHWLHHKGLCRPNTENVGLPFLISVPESRLSYARLTQLLEGYTRFSVNVFQPPFQSD
RTSPETPQSRTDLPPMPAGSPEGPGSVDEAVGGSSVGAADQDLESPPLLPEAQAESAQAS
ALLSGDSLSSSQNSLSTTRTADSGFSEPISSASCCSLDHLAEKETSCEKAVRPEAAVTGY
QQPIESASGHASQFYIAVLDYNNKEQRLDEREDLLADLPEDATLELVWKNNERLKEYVLV
SSKELEYDEDPGSLSETARAGHFTLEQCLNLFTRPEVLAPEEAWYCPKCQQHREASKQLL
LWRLPNILIIQLKRFSFRSFIWRDKINDMVDFPVRNLDLSKFCIGQKDDMQQPPIYDLYA
VINHYGGMIGGHYTSYARLPSDKNSQRSDVGWRLFDDSTVTMVEESQVVTRYAYVLFYRR
RNSPVERQPRFLRPVGAESPTSAGATASQASLIWRELEEEEEGLDEGPRGLFRSPLRRRQ
TQRNEDEEEEEEEADRSDGAVRRPRRQRMSDYPDDDCVRYFVVGTLAALFALFLNLVYPL
LYRANWA
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atggccagcagcggtggtagcggtgtggctggttccgagacagtgggccgtcgcggtggg
gctcagcagagggggggtggtgtcagggagaacagctctgacctgtcctccagtaccagt
aagaagaagcagaaggaccgggccaaccaggagagcagagaggccaagagggcagccgct
gcagcagtggacggggtcattgcagaggtcaagaaagatgtgtttgtggactggaagcag
aatgtcaatgaagtgacggtcagactgcgctgtggagagggggtgcagagaatagaggat
atcaacacgaccttcactgatactcactgccatgtgcacttcccagatggacggcagtgg
agctgccagctgcaggaggagatcgaggcgtcatgcagcagagtccaacacaaggagaag
ggaggcttcctgcacgtcatcatgcacaagaagattcccttccacatctggccttcgctt
aagtcaaataagaaggagaaggagaccgttcctattgagatcaaaaaagagaaggaactg
gaggggaagcccgttgcctcggagtcatcagagaaacccaaagtgtcctccacgcagcca
aatcagcagcctccctcgacaccggcacacagcgagtccaggcgcggtggcagcaaggca
gagcggggggtgaagcgcggcctgaaaaacaaacaagcgtgtgacaaaaccactacagac
tctgcaggggtgaaaggtggagatagctcagcccccaccagcaagcctgtcgcagtcacg
caaggagagcctcaggaacccagtgccaagcgcaccatcacacagctgcccgcggcaacc
aaggaggccacgtcacctgccgacagggacgctcacacacacctgcccgctggtcggagc
ccacagacacaacgcagagatggagacaacaaaggcggaggagaggaacagagagcagga
gtcgctgctggcagccatactaacaaaactcaggtggcagaaaagcgtaaccattcttca
gaaagatctggaacagcagcacacagcagtgacgaccaaccagcagctcccgtcagcacc
gttaacggcctccaaacagataaccagctacctgtcggcttcaacaaggaagtgaactca
gcctctcctgaaatgcagggagatagaactgactctgaactacagaaaaagcctgttgag
caggaatcagagcaggatactctgattcgccagcagcagcagcagcttgaatcaaaggaa
gcgggttcgataccagctgttggcatggcagccaaacagagccagtcacctgctgtagcc
cagaggcagggcagctgtgacggagaggagaagcaagaccagtccaaggaggagccccct
ctggaaataaaacaacaggaagtcccagagcccatggtcaacctgcagattttgaagtat
gactcgtacgagaagggcaccgacctgatggtggtgaatgtttacacgaaggggatctgc
agggacacggccagggtcatcttcagggaacaggacttcaccctcatcttccagacaagt
gatactaactttctgaagctacatccagactgtggaccaaacacagtgttcaagtggcaa
gtcaaactcaggaacctgatccagcccgagcagtgcagctactccttcaccccgtcccga
ctggacatcagcctgaagaagaggcacagccagcgctgggggggtctggaggcccccgcc
actcaaggtgcagtgggtggagccaaggtcgctgttccttccagcccatcctgcatggag
aagagtcagccgggcagcagccagcacaaccaccccgccatggaggagccccccagggtc
ggggaggagaaacccaagccccctaaagccttgtccaggatggatgatggaggtctggat
aacgtggctcctcgctccgtctctgagcatgtccctatctccaagccagagctagctgtt
accacgcctaaacccacctgcatggtgcagcccatgacccacgccactcccgccagcaac
gagcgccatgaagaagaggaggagaagaaggtgtgcctgcctggttttacaggattggtc
aacctcggaaacacctgcttcatgaacagcgtcatccaatccctgtccaacagcagagaa
ctcagggattacttccatgatcgagggtttgagtcagaaatcaactgcaataatcctctg
gggacaggaggccggctagccattggtttcgctgtgctcctcagggccctttggaaagga
acacatcatgccttccaaccctccaaactcaaggctatagtggccagtaaagccagtcag
tttacaggctacgcccagcacgacgcccaggagttcatggcgttcttgctggacgggctc
catgaagacttgaaccgcatccagaacaaaccttacacggagacggtggactctgacggg
cggctggatgaggtggtggcagaggaggcatggcagaggcacaagatgagaaacgattcc
ttcatagtggacctcttccagggccagttcaaatccaagctggtctgccccatgtgctcc
aaggtgtccataacctttgaccctttcctttacctgcccgtgcccctaccccagaaacaa
aaggtgctctcagttttctactttgctaaggaacctcataagaaacccatcaagttcttg
gtgagtgtgagtaaggagaactccagcacggctgaagtcctcgaatccatttccaggaat
gtccgcgtcaaaccagagaacctcaggctggcagaggtggggaaaaaccgcttccagcgc
atgttcctgcggtcccactccctggacacggtgtcctcctccgacatgctgttctgcttt
gaggtgctctccaaagacatggccaaagagagggtggttctgctccgagtgcagcagaga
ctccaggtccctaatattcccatctctaagtgtgccgcctgcttgaagcctccggtgtgt
gatgacgacaagctgaagcgctgcacacgctgctatcgtgtgggctactgcaaccaagat
tgtcagaagacccactggctccatcacaagggtctgtgtcgccccaacacagagaacgtg
ggcctgcccttcctgatcagcgtgccagagtcccgcctctcctacgcccgcctcacccaa
ctgctggagggctacaccaggttttccgtcaacgtgttccagcctcctttccagtcagac
aggacatcccccgaaacaccccagtcccgcactgacctccccccaatgccagcaggctct
cctgagggccctgggtccgtggatgaggctgtgggtggcagcagtgtaggagcagctgat
caggatctggagagcccccccctgctgcctgaggcccaagcagagtccgctcaagcctca
gcgctcctctccggggactccctgtcctcctcccagaactccctctccaccacacggact
gcagactcaggattctctgagccgatctcctctgcttcctgctgctctctggaccatctg
gcagagaaagagacgtcttgtgagaaagcagtgcgcccagaagctgcagtaacaggctat
cagcagccaattgaatcagcatcgggtcacgccagtcagttctatatcgctgtgctggac
tacaacaacaaggaacagaggctggatgaaagagaggaccttcttgcagacctccctgaa
gacgccaccctggagctggtgtggaaaaacaacgagcgtctgaaggagtacgtgctggtg
agctctaaggagctggagtacgacgaggaccccggctctctgagtgagacggccagagca
ggacacttcaccctggagcagtgcctcaacctcttcaccaggccagaggtgctggctcca
gaggaggcatggtactgtccaaagtgccagcagcaccgagaggcctccaagcagctgctg
ctgtggcgtctgcccaacatcctgatcatccagctcaaacgcttctccttcaggagcttc
atctggagggacaagatcaacgacatggtggacttccctgtcaggaatctggatcttagt
aagttctgtattggccagaaggatgatatgcaacaacctcccatctacgacttgtacgca
gtcatcaaccactatggaggaatgatcggaggtcactacacttcctacgcccgcctgccc
agtgacaagaacagccagcgcagtgatgttggctggcgtctgtttgatgacagcaccgtg
acaatggtggaggagagccaggtggtgacgcgctacgcctacgtccttttctaccggcgg
cgaaactcccccgtggagaggcaaccgcgcttcctcaggcccgtaggagccgagtcgccc
acttctgcaggagccactgccagccaggcctctctaatatggcgggaactggaggaagaa
gaggaggggcttgacgaaggcccccgcggactgttccgctctccgctgcggagacgacaa
acgcagaggaacgaagatgaggaggaggaggaggaggaggcggacagaagcgatggggcg
gtgcggcggccccgcaggcagaggatgtcggactatcctgacgatgactgtgtgcgatac
tttgttgtgggaacgctggcagcgctgttcgctctgttccttaatctggtctaccctctg
ctgtacagagccaactgggcctga
DBGET
integrated database retrieval system
