Trematomus bernacchii (emerald rockcod): 117497936
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Entry
117497936 CDS
T09643
Symbol
usp12b
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12
KO
K11842
ubiquitin carboxyl-terminal hydrolase 12/46 [EC:
3.4.19.12
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117497936 (usp12b)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117497936 (usp12b)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117497936 (usp12b)
Peptidases and inhibitors [BR:
tben01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117497936 (usp12b)
Ubiquitin system [BR:
tben04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117497936 (usp12b)
BRITE hierarchy
Motif
Pfam:
UCH
UCH_1
Peptidase_C98
DUF5740
NapB
CEBP_ZZ
Motif
Other DBs
NCBI-GeneID:
117497936
NCBI-ProteinID:
XP_034005858
EnsemblRapid:
ENSTBNG00005011365
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MEILMTVRKIASICTMGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFC
RPFREKVLAYKVQPRRKESLLTCLSDLFNSIATQKKKVGVIPPKKFISRLRKENELFDNY
MQQDAHEFLNYLLNTIADLLQEEKSQERQQNGKLVQNGGGGGGSEGGGGGEGEGVKETQQ
TWVHEIFQGTLTNETRCLNCEAVSSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEY
KYYCEQCRSKQEAQKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNT
SGDATNPDRMYDLVAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYG
LTSDISKNSESGYILFYQSRD
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggaaatactgatgacagtccgaaagatcgcctcgatttgtacgatgggcgccaatgcc
tctgccttggaaaaggagatcggaccggaacagtttcccgttaatgaacactactttgga
ttggtcaactttggaaacacctgctactgtaactcagtgctgcaggcgctgtatttctgt
cggccgttcagagagaaggtgttggcgtacaaggtgcagcctcgtcgtaaggagtctctc
ctcacctgcctctccgacctcttcaacagcatcgccacgcagaagaagaaagtcggggtc
atccctcccaagaaattcatctccagactgagaaaagaaaatgagctgtttgataactac
atgcagcaggacgcccacgagttcctcaactacctcctcaacaccatcgccgacctgctg
caggaggagaagagccaggagaggcagcagaacgggaaactggtgcagaatggaggaggg
ggaggaggaagtgagggaggaggaggaggagagggggaaggagtcaaggaaacacaacag
acctgggttcacgagatcttccagggaacgctgaccaatgagacgcgctgcctcaactgt
gaagctgtgagcagtaaagacgaagacttcctggatctgtctgtagacgtggagcagaac
acctccatcacacactgtctcagaggcttcagcaacacagagacgttatgcagtgaatac
aaatactactgtgagcagtgtcgcagcaaacaggaagcccagaagaggatgagggtgaag
aagctcccgatgatcctcgccctccacctgaagcgcttcaagtacatggaccagctgcac
cgctacaccaagctgtcctatcgggtcgtcttccctctggagctccgcctcttcaacacc
tcgggggacgccaccaaccccgaccgcatgtacgacctggtggccgtcgtggtgcactgc
ggcagcggtccaaaccgcggacactacatcacgatcgtgaagagccacggcttctggctg
ctgttcgacgacgacatcgtagagaaaatcgacgcgcaggcgatcgaggagttctacggt
ctgacgtcggacatctccaagaactcagagtccggatacatcctgttctaccaatccaga
gactga
DBGET
integrated database retrieval system
