Thiocapsa bogorovii: LT988_00390
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Entry
LT988_00390 CDS
T07840
Symbol
dinB
Name
(GenBank) DNA polymerase IV
KO
K02346
DNA polymerase IV [EC:
2.7.7.7
]
Organism
tbog
Thiocapsa bogorovii
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbog03400
]
LT988_00390 (dinB)
Enzymes [BR:
tbog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LT988_00390 (dinB)
DNA repair and recombination proteins [BR:
tbog03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
LT988_00390 (dinB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH
DNA_pol_lambd_f
DUF4113
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UHD16560
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All DBs
Position
75410..76588
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AA seq
392 aa
AA seq
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MSRLVMHVDLDAFYAAVEQRDHPAWHGLPMVVGAEPGRRGVVATCSYEARRFGVHSAMPI
AEAVRRLPADAVYVRPDMARYAEVSREIMRVLGTLSPLVEPVSIDEAYLDVSGLERLIGP
PEVVARRTKAAIHEAVGLTASVGIGPNRLIAKLASDARKPDGLLVVRPEEVRAFLDPMPL
AALRGVGAVTARRLERAGLRTVGDVRSRPLEELRRRLGARTGTQVHLQSNGIADDRVHPA
TERQSISKETTFAEDVVDTEVLRDTLRWAAQEVGYLARAIARKGTLVTLKIRLHPFETHT
RSRTLAAPTADDRVIFDTAWDLYRADTHAGRAVRLIGLGLSGWAQAPAQPDLFADLDPRK
ADHADDRLDATLDAIRRRFGRHCIQRGLLRRP
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcctcgtcatgcacgtcgatctcgacgccttctacgccgccgtcgagcaacgc
gatcaccccgcttggcacggactgcccatggtcgtcggcgccgagcccggtcggcgcggc
gtggtcgcgacctgctcctacgaggcacgccgcttcggcgtgcactcggccatgccgatc
gccgaggcggtgcgtcgtctgccggcggatgcggtctacgtgcgcccggacatggcacgc
tatgccgaggtgtcgcgggaaatcatgcgggtgcttggcaccctctccccattggtcgag
ccggtctcgatcgacgaggcctacctggatgtctccggattggagcgcctgatcggtccg
cccgaggtcgtcgcacggcgcaccaaggcggctattcacgaggcagtcggcctgaccgcc
tcggtgggcatcggtccgaaccgcctgatcgccaaactggcctcggacgcccgcaagccg
gatggactgctggtggtgcgccccgaggaggtccgcgccttcctggatccgatgccgctc
gccgccctgcgcggcgtcggcgccgtgacggcccgacgactcgaacgggccggcttgcgg
acggtcggcgacgtgcgctcccggccgctggaggaactgcgccgacgcttgggcgcacgc
accggcacccaggttcacctgcagtcgaacggcatcgccgacgaccgggtccatccggcc
accgaacggcaatcgatctccaaggagacgaccttcgccgaggatgtcgtagacaccgag
gtgctgcgcgacaccctgcgttgggcggcgcaggaggtcggctacctggcccgagccatc
gcacgcaagggtacgctggtcaccttgaagatccgcctgcatcccttcgagacccatacc
cgctcccggaccctggcggcaccgaccgcggacgatcgggtcatcttcgacacggcgtgg
gacctgtaccgggccgacacgcatgccggtcgcgcggtgcggctgatcggtctggggctc
tccggctgggcgcaggcgcccgcgcagccagatctcttcgcggacctggatccccgcaag
gccgatcacgcggatgatcgtctcgacgcgacgctcgatgcgatccgacgtcggttcggc
aggcactgcattcagcgcgggctcttgcggcggccatag
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