Thiocapsa bogorovii: LT988_01625
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Entry
LT988_01625 CDS
T07840
Name
(GenBank) starch-binding protein
Organism
tbog
Thiocapsa bogorovii
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM26
Motif
Other DBs
NCBI-ProteinID:
UHD16789
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Position
complement(348439..350607)
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AA seq
722 aa
AA seq
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MSDLILHFERRPGWGSIVRAYVWDAQPIGPRTDWPGVPMEALDDDWYRISLPGTRSAHLV
FTDGEGHQTHDHFRDADGWLDARSHWHDHRPGHRVRSVKSAEAPPDSRPVPSFQTELRPV
AERSDFREETIYFLITTRFYDGDPSNNFFCRDRIQFDANGNPVDPHWRGDFKGLIQRLDY
IRDLGFTAIWITPPVENRSGLDYHGYHPYDWTRIDPRLESPGATYRDLIDVAHAKGIKII
QDVVVNHSCQYGIRGQVHVDHLPIKYYVPQGSEQGKVDHGPYQGHLGNYAWPNRDDIDNP
VAPQWYRERHGRDPEGIEPLVDHKTGETVPKPGYHPGRFFGVDPHDLDPEWYHQEGFICG
GDWESPHPLQHKHLAGDCIDLATERHNVKDYLIGSINRYLDMGVDALRIDTVKHVERDNL
LEYVNAWKSHKPGLFVFGENLVKGYGWGDLGGGDNGPSQIRPWWYTRIGHDPQDPESGGD
SGFPQLDFGLFSTFRDTVSKGTYSGTAQILGMDWIYGDVTQLVTFLQNHDVGPDNDFKYR
FKGDQWMAAAAYNLIWTVRGIPCLYFGEEIEFMKGAPQDVEGERDTLHQTGRAYFGDHLS
DGRLAKTQAHPLYRHIQRLNLIRRAIPALQKAGLSHLAEWGSGMRFVRDHPQSGTYVVVG
LAIGSDQEIGIDGVRPGVYRDAVTGREQDCQGRLLFHVKANSAGIYVLDGPGKIGEDGVY
LR
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatttgatcctccacttcgagcgccgtcccggctggggctcgatcgtccgagcc
tatgtttgggatgcccagccgatcgggcctcgcaccgattggcccggtgtgccgatggag
gcgctcgacgacgactggtatcggatcagtctgcccggaacccgctctgcgcatttggtc
ttcaccgatggtgaaggtcaccagacacacgatcattttcgcgatgccgacggctggctc
gatgccaggagtcactggcacgatcatcgccccggccatcgggtgcgctcggtaaagagt
gccgaggcgccccccgattcccggcccgtaccgagtttccagaccgagctgcgcccggtc
gccgagcggagcgatttccgcgaggagaccatctattttctgatcaccacgcgcttctac
gacggcgatccctcgaacaattttttctgccgcgaccgcatccaattcgacgcgaacggc
aatccggtcgatccccattggcggggcgatttcaagggcctgatccagcgcctggactac
attcgggacctcggcttcacggccatctggatcacgccgcccgtagagaaccgctccggt
ctcgattatcacggctatcacccgtacgactggactcggatcgatccgcgcctggagtcg
ccgggagccacctatcgggacctgatcgacgtcgcccatgccaagggcatcaagatcatc
caggatgtcgtcgtgaaccattcctgccagtacggcatccgcgggcaggtgcatgtcgac
catcttccgatcaaatactacgttccccagggctccgagcaggggaaggtcgatcacggc
ccctaccagggccatctcggcaattatgcgtggccgaatcgcgacgacatcgacaacccg
gttgctccccaatggtaccgtgagcgtcatggcagagatcccgaaggcatcgagccgctg
gtcgatcacaagaccggcgagacggtgcccaagcccggctatcacccggggcgtttcttc
ggtgtcgacccccatgatctggatcccgagtggtatcaccaggagggcttcatctgcggc
ggcgattgggagagcccgcatccgctgcagcacaaacacctagcaggcgactgcatcgac
ctggccaccgagcgccacaacgtcaaggactatttgatcggttccatcaaccgctatttg
gacatgggtgtggatgcgctgcgcatcgacaccgtgaagcatgtcgagcgcgacaatctg
ctcgaatacgtcaacgcatggaagtcacacaagccgggtctcttcgtgttcggcgagaat
ctggtgaaaggctatggctggggcgatctcggcggcggcgacaacggtccctcgcagatc
cgaccctggtggtacacgcgaatcggccatgaccctcaagatccggaatccggcggggac
tcgggcttcccgcagctcgatttcggcctcttctcgaccttccgcgacaccgtcagtaag
ggcacctattccggcaccgctcagatcctcggcatggactggatctacggcgacgtgacc
cagttggtcacctttttgcagaaccatgacgtcggcccggacaatgacttcaagtaccgc
ttcaagggcgatcagtggatggccgccgcagcctacaacctgatctggaccgtgcgcggg
attccctgtctgtatttcggcgaggagatcgagttcatgaagggcgcgccccaagatgtc
gagggcgagcgggataccttgcatcagaccgggcgcgcctatttcggcgaccacttgagc
gacgggcgtctcgccaagacccaagcccatccgctctatcggcacatccagcgcctgaat
ctgatccgccgtgcgattcctgcgctccagaaggcaggtctgagccacctcgccgaatgg
ggcagcgggatgcgtttcgtgcgcgatcatccgcagagcggcacctatgtggtggtcggt
ctcgccatcggctcggatcaagagatcgggatcgacggggtccgacccggtgtctatcgc
gacgcggtgaccggccgggagcaagactgccagggtcgtttgctgtttcacgtcaaggcc
aactcggcgggaatctatgtcctggacggcccgggcaagatcggcgaggacggggtctac
ttgagatga
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