KEGG   Thiocapsa bogorovii: LT988_23185
Entry
LT988_23185       CDS       T07840                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
tbog  Thiocapsa bogorovii
Brite
KEGG Orthology (KO) [BR:tbog00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tbog02044]
    LT988_23185 (tssF)
Secretion system [BR:tbog02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LT988_23185 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: UHD16118
LinkDB
Position
complement(5206665..5208542)
AA seq 625 aa
MDPRLLAHYNRELQHLRGIGGEFAAEFPKIAGRLGLTAFECADPYVERLLEGFAFLAARV
QLKIEDEFPTFTQHLLEMIYPHYLAPTPSMAVVQLQPDPTEGALAAGFAIPRDTLLRGTL
GKGEQTACEYRTAHETVLWPIEITQAEYFSHAGPVAKTDLPALNRSKAGIRLRLRATAGL
NLRDIQLDQLVLFLQGSDEVPFTLYEQLTANPVAVLIQPLPRPLPWLTELPGSTLKPLGF
SADEALLPYTLASFQGYRNLHEYFAFPERYLFVALDGLAPALAQLNAPEVDIIVLLPSPA
KALDGALDAGNFALHCTPAINLFPKRCDRIHLDKGGPEFHVVPDRIRPMDFEIYRVDGVS
GYGASSTTSREFRPFYAATDLTHPDEHPAYYSVHRVPRRLSSRQRRQGPRSSYSGSELYV
NLVDAAAAPWSAELRQLGVTCLCTNRDLPLQMPVGAGKTDFSLESGAPVQAVRVRAGPTA
PKPSHAHGDTAWRLISHLSLNYLSITDTDGGTGAGALRELLALYADLTVAGARHQLEGLR
SVSSRPITRRLPGVRPITYARGIEIALDLDESAFEGTGAYLLGTVLERFFARYASINGFT
ETLLTTPDRGELKRWPATIGLRPTL
NT seq 1878 nt   +upstreamnt  +downstreamnt
atggacccacgtctcctcgcccattacaaccgagaactccaacacctgcgtggaatcggc
ggggagttcgcagccgagttcccgaagatcgccggccgcctcggcctcaccgccttcgaa
tgcgcggacccctacgtcgagcgcctgctcgagggtttcgcgttcctcgccgctcgcgtc
cagctcaagatcgaggacgaatttccgaccttcacccagcacctgctggagatgatctat
ccgcactacctggccccaacgccgtcgatggccgtcgtgcagttgcagccggacccgacc
gagggggcgctggcagccggcttcgcgatcccgcgtgataccctgctgcgcgggaccctc
ggcaagggcgagcagacagcgtgcgagtaccgcacagcgcacgagacggttctttggccc
atcgagatcacccaggcggaatacttcagccatgccggcccggtcgcgaagaccgacctg
ccagccctgaaccgcagcaaggcgggcatccgcctgcgcctgcgcgcaaccgcgggcttg
aacctgcgcgacatccaactcgaccaattggtgctcttcctgcaaggcagcgacgaggtg
ccgttcacgctgtacgaacagctcaccgcgaatccggtcgccgtactcatacagccgttg
ccgcgccccctgccctggctgacggaacttcccggctccacgctgaaaccccttggattc
tcggcggacgaggccctgttgccatacacgctggcctctttccaaggctatcgcaacctc
cacgagtatttcgcgtttcccgagcgctacctcttcgtagcgctggacggtctggccccg
gcactggctcaactgaacgcaccagaggtcgacatcatcgtactcctgccgtcgccggcg
aaggcactcgacggcgccctcgatgccggcaacttcgcactgcactgcacgcctgccatc
aacctgtttcccaagcgctgcgatcgcatccatctcgacaagggcgggcccgaattccat
gtcgtcccggaccgcatacgacccatggacttcgagatctatcgtgtcgacggtgtatcc
ggctatggggcatcgagcacgacctcccgcgaatttcgtcctttctacgccgcaaccgac
ctaacccaccccgacgagcatccggcctattacagcgtgcaccgcgtcccccgcagactc
tcgtcgcgtcagcgcagacagggtccgcgatcgagctattccggcagcgaactctacgtc
aacctggtcgatgccgccgcggcaccctggtcagcagaactgcgccagctcggggtcacc
tgtctctgcaccaatcgagacctaccgctgcaaatgcccgtgggtgcgggcaagacggac
ttctctctcgaatccggggctccggtgcaggccgtgcgggtgcgtgctggaccgaccgcg
ccgaaaccatcccatgcgcacggcgatacggcctggcgactgatcagccatctttccctg
aactatttgtccatcaccgataccgacggcggaaccggtgccggagcgctgcgcgaattg
ttggccctatacgcggacctcaccgtcgccggggcgcgccatcagctcgaggggctccgc
tcggtgtcttcgcgccccatcacgcgccgtctccccggcgtgcgcccgatcacctatgcc
cgtggaatcgagatcgcgctcgacctcgatgagagcgccttcgaggggaccggtgcatac
ctgttaggcacggtcctcgagcgcttcttcgcgcgctatgcctccatcaacggatttacc
gagaccttgctcacgacccccgaccgcggagagctgaagcgatggccggcgaccatcggc
ctgcgcccgaccctctag

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