Trypanosoma brucei brucei: Tb927.2.450
Help
Entry
Tb927.2.450 CDS
T01013
Name
(RefSeq) retrotransposon hot spot (RHS) protein, putative
Organism
tbr
Trypanosoma brucei brucei
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHSP
RHS_N
Motif
Other DBs
NCBI-GeneID:
3655321
NCBI-ProteinID:
XP_951483
UniProt:
Q584M8
LinkDB
All DBs
Position
2:complement(77151..79724)
Genome browser
AA seq
857 aa
AA seq
DB search
MNQQVPIEGRGDIEGRRRENEEAARNDAEPPAVQQRVENNNQPQWSLFSRVDAVLLEGRV
HPENVSVNDFLRRNFGRRYNVNEENNVSMFVFVLEPEEYINDVNALNLIFATAEYKVYKR
FVSVYGFFEDEGILDLQQWQQADEVVKAGLQVNIRGLRDGERLWIVVNALLNNALNVALE
RAAQTAASAVEIKGVYDSIYNAKWSYVMSGYDEEPLGMKVFDGRPPHMWTKEEVDITPLP
ANVDARVPERPYGLEIFVLTSEKGWPYNRFASRDVNIRKNNFKHVYIRREIMRVWYIIQR
GLQAWWVEKTAQRTPIHIVIGTPGIGKSYGVGSFLLHSLLHFNDGMLDVVAYFVGEIAFL
IYNKKPGEEGRVEKYVVSKNAITAMDALENKRGHIIVDIGNDLLKPPGELRHLSWGVTVL
TSPDTAHYEEWAKDTGDRQIIINCDDVRDMKAFVAWKKLCVLSEEVPRDKTKQQLMEDLE
SEWKIVEERIDMVGPLPRFVFSVSDYDARLESVRKEARQLDSDNGKKYDKIISKSKGWQN
DKVTHKLVKIVRVSSGTVNVDSYRCRSLSVNIWNMLICTLFGILIVEMTSKEITLSDECV
GANAFERLALLSLLFPRVFKVIADNLKYLRRGREIADRRNILNDMAPQQLRLIGQKALPA
ARQQPIDNCEYMVLYLPATGNEPVVDGFFFVEGRFRRNRDGAAPPTTPNIAVLLQVTKSE
RHPTTTDKVQKFRKNMERYFSDWGAFSRNMVWEMIYINSVNGGTITIRQLCEGPPDRDQG
EDGGPLGPQTFWESIDQFQVTLKETMQAELIRAYRRESGMRDAPALIGLAGRRRAREEVV
EGRGDVAMDDVEGGEDA
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaacaggttcctattgaaggaaggggtgatattgagggaaggagacgagaaaat
gaggaggctgcgcgtaacgatgcggaacctccagcagtgcagcagcgagtggagaataac
aaccaaccacaatggagtcttttcagccgcgttgacgcagttttgctggaaggtcgggtc
catcctgaaaatgtgagtgtaaatgattttttgaggcgtaattttggcagaagatataat
gtgaatgaagaaaataatgtatcaatgtttgtgttcgtactggaacctgaagagtatatt
aatgacgttaatgcgctcaatctaatattcgcgacggcagagtataaagtgtacaaacgt
tttgtcagcgtctatggtttctttgaggatgagggaatattggatcttcagcagtggcaa
caagcagatgaggtagtaaaggccgggttacaggtgaatattcgtggactgagagatgga
gagcggctttggattgttgtcaatgcgctactgaataatgcactcaatgtagcattggaa
cgggctgcccaaacagctgctagtgctgtcgaaattaaaggagtgtatgattccatttat
aatgcaaaatggagttatgtaatgtcgggttatgatgaagagccacttggcatgaaagtg
ttcgatggcagaccgccgcacatgtggacgaaggaggaggtggatataactcctcttcct
gcgaatgttgatgcacgagtgccggagagaccttatggtttggagatttttgttctcact
tcggagaagggttggccatacaacaggtttgcatcgagggacgttaatatacgcaagaac
aattttaaacatgtatacatccgtcgtgaaattatgcgcgtgtggtatataatccaacga
gggttacaagcatggtgggtggaaaagacagctcagagaacaccgatacatattgttatt
ggtacacctggtattggaaagtcgtatggagttggatcatttttgcttcattcattgctt
cacttcaatgatggaatgcttgatgttgttgcatatttcgtgggagaaatcgctttctta
atatataacaagaaacccggagaagaggggagggttgaaaagtatgtggtctcaaagaat
gctattacggctatggatgcgttagaaaataaaagaggtcacatcattgttgacatcggt
aacgacctacttaaaccgcctggtgagctgcgccatttgagttggggtgtaactgtcctt
acttccccggatacggcacattacgaggagtgggcaaaggacacgggagaccgccaaatt
attataaactgtgatgatgtgcgtgacatgaaggcatttgtggcatggaaaaagctgtgt
gtgctttcggaggaggtgccgcgcgacaagacgaagcagcagttaatggaggaccttgaa
agcgagtggaaaattgtggaagagcgcattgacatggttggtccactgcctcgttttgtt
ttctcagtctctgactatgacgcacgactggaaagtgtgcgtaaagaagctaggcagctc
gatagcgataacggaaagaaatatgataagattattagtaaatctaagggctggcaaaat
gataaggtaacgcacaaattggtgaagatagtgcgggtaagctctgggactgtcaatgtc
gattcatatcgttgcagatcgctttctgtcaacatttggaatatgttgatttgcacatta
tttggcattcttattgtggagatgacgtcaaaggagattacattatcagacgagtgtgtt
ggggccaacgcttttgaaaggcttgcgttgctttcgcttcttttccctcgagtttttaaa
gttatcgcagacaacttgaaatacctgcgacgaggcagagaaatagctgaccgtcgaaac
atactgaacgacatggctcctcagcagttgagactcattgggcagaaggccttacctgcg
gccagacagcaaccaattgataattgtgaatacatggttctctacctccctgccacaggc
aatgaacccgtggtggatggcttttttttcgttgaggggcggttcaggagaaaccgtgac
ggagcagcgccaccgaccactccaaatatagctgtgcttttacaagtaaccaagtcggag
aggcaccccaccactacggataaggtgcagaagttccgaaaaaacatggaaagatatttt
tctgattggggtgcgttttcccgcaacatggtttgggagatgatatacattaattcggtt
aacggtggcacgataaccatcaggcaactttgcgaaggacctcccgatagagatcaaggt
gaggacggaggtcctctgggaccacaaacattttgggaatccatcgaccaattccaagtg
acactcaaggaaacgatgcaagcggaattaattcgggcatatcgccgagaatctggcatg
cgagatgcaccggcattgatcggactggcgggaaggcggcgcgctcgtgaagaggttgtg
gaggggcgaggtgacgtagcaatggacgacgtggaaggaggtgaagacgcgtaa
DBGET
integrated database retrieval system
