Tribolium castaneum (red flour beetle): 655198
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Entry
655198 CDS
T01046
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
655198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tca03019
]
655198
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
655198
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
655198
NCBI-ProteinID:
XP_015835408
UniProt:
D6WNA2
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All DBs
Position
LG5:2181728..2190973
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AA seq
944 aa
AA seq
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MGDKAQEHPEGASKDSEIIPGYSSMEQFTKDGFKVLMEAIKHSNALPSGRDWDFYNISDS
FKEIMKVEGNHVLRLMNQVMRCNDLDSNLRNRVLDEKIELVIEANDIILEKVANNIDEMN
GIRKTVVAPVVLQTVSAQLPVNGSWNRQTAATVTVSSVVPESSGQNCIKLITAKNIIRPQ
KFFKDQIDNRNKTPWSPRITEKPNSLKPLAIFLEEYEDRQEYSHPYEFELDRFQPTPSQL
IDEKSVPPKSLSDTPLIEIDKAEQLDELVETLRHCKEFSVDVEHHSYRSFMGITCLIQIS
TEDKDYLIDALALRDKLSILNEVFTKNTIVKIFHGADKDIEWLQRDLSLYVVNMFDTHQA
AKALQYPALSLAFLMKKFCNVTPNKQFQLADWRIRPLPDELKSYAREDTHYLIYIYKMMK
RELLHKTNKCDKLLRSVIERSTEVCKKRYFKPILHEDSHLELYRKCKKMFDNRQMYALKE
IYVWRDNIARIEDESLGYVLPNHMLLQISELLPREMQGILACCNPIPPLVRSHLLELHQI
ILKAREQPLEKAILKETSGRGVLKEMSKVNMDSVLHCPHDLTKTNEFRDDLPTLLQNEQY
KAENKRVAQVDLAIEKPSSYSIFNSDQGFKPGEAFKKLHTSAYLSPYERYKLVKPFVVAE
DEAAKAQKEKDEKTDDERITSIRDHFVQLSKKFSEELQAQKEEEERKERELSLIEMGASR
KRKRDEIDSESPDVVIVEDSFYTPVPVISDVIDENNFYRRKKPRKRKFDEINDGGNEGGK
KKKNKKKGKKGNVQAPGQFKNEGNKLNLTQVRSFKTEGKQQNQIPIHQNKGNGNKQNQAQ
NVPKSKRKRNNAGQGPQNVQKGGNQPKKKFKCKNAEQNNKSSNFMPYDYSSVDFRQFQGG
AGSASGGVQMKRTFQPKNRGKHNKKGAKSSTFANLGRHNRGQHN
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacaaagctcaggagcaccctgagggagcaagtaaagactcggagattatcccg
ggctactcgtccatggagcagtttacgaaggacggctttaaggtcctaatggaggcgatc
aagcactccaatgcgttaccgtcgggtcgcgactgggacttttacaacatttccgactcc
ttcaaagaaatcatgaaagtggaaggcaatcacgtcttgcgtttaatgaaccaagttatg
cgttgcaatgatctagacagtaatctaaggaaccgtgttttggacgagaaaatcgagctt
gtgattgaggcaaatgatataattcttgaaaaagttgctaataatatcgacgaaatgaac
gggattcgcaaaacggtggttgcaccagtggtgttgcaaacggtcagcgcccagttgcct
gtgaatgggtcttggaatcggcaaaccgctgccactgttactgtgagttcggttgttcct
gagtcaagtggccagaactgtatcaaactgattaccgccaagaatattattaggccccag
aaatttttcaaggaccaaattgataacaggaataagacgccttggtctccgaggattacg
gaaaaaccaaattcgctgaaaccgttggccatatttttagaagaatatgaagacaggcaa
gaatattctcatccttacgaattcgagttggatcgcttccaacctacaccttcacaacta
attgacgaaaagtcagtaccgcctaaaagcctttcagacacccctttgattgagatagac
aaagcggaacaactagacgagctagttgaaacgctcagacattgcaaagaattttccgtt
gatgttgaacaccattcttaccgatctttcatgggaatcacttgtctcatccaaatttca
actgaagacaaagattatctcattgacgctctagctttacgcgataaactctcaattctt
aacgaagtttttaccaaaaacacaatcgttaaaatatttcacggggccgataaagacatc
gaatggttgcagagagatttatcactttacgttgtgaatatgttcgatacgcatcaagca
gcaaaggcgttgcaatatccagcactgtctttggctttcctaatgaaaaagttttgcaat
gttactccaaacaagcaatttcaattggctgattggagaattcgtccgttaccagacgaa
ttaaaatcatacgctcgagaggacacccactatcttatttacatttataaaatgatgaag
cgagagttgttgcacaaaaccaacaagtgtgataaactcttgcgatcggtgattgaacgc
agcactgaagtttgcaaaaagcgatatttcaaaccgattttgcacgaagacagccatttg
gagttgtaccgaaagtgtaaaaaaatgttcgacaatcggcaaatgtacgccttgaaggag
atttatgtgtggagggacaacatagcgagaattgaagacgaaagtttaggttacgttttg
cccaatcacatgctgctgcaaatttccgaactgcttccgcgcgaaatgcaaggtattttg
gcttgttgtaacccaattccgcccttggtcaggtcccatttactcgaattgcatcagatt
attttaaaggctcgtgagcagcctttggagaaagcgattttgaaagagacaagtggtcga
ggcgttttgaaggaaatgtccaaagtgaacatggacagtgttttacactgtccacacgac
ttaacaaagacaaacgagtttcgggacgatttaccaactctgctgcaaaatgagcaatac
aaagcggagaataaaagggtggctcaagttgatttagcgattgaaaaaccgtcatcatat
tcgattttcaactccgatcaaggtttcaaaccaggtgaagcgtttaaaaaactgcacact
tctgcgtatttgagtccttatgagcggtacaagttagttaagccgttcgttgtggcagaa
gatgaggcagcaaaggcgcaaaaagaaaaagatgagaaaactgatgatgaaaggataact
tcgattagggatcatttcgtgcaattatccaagaagtttagtgaggagttgcaagcgcaa
aaagaggaagaagaacggaaggagagagaattgtcattgatagaaatgggtgcttcaagg
aaaagaaaacgagatgaaattgattcagaatcgcctgatgtggtgatagttgaggacagt
ttttatactccggttccagtaataagcgatgttattgatgaaaataatttctatcgcaga
aaaaagccacgcaagcggaaatttgatgaaattaatgatggaggtaatgaaggtggtaaa
aagaagaaaaataagaaaaagggaaagaaagggaatgtacaagctcctggacagtttaaa
aatgaaggaaacaaactaaatctaactcaagttcgttcatttaaaactgaaggaaaacaa
caaaatcaaattccaatccatcagaataaaggcaacggaaataaacaaaatcaggctcaa
aatgtaccgaagagtaaaaggaaaaggaataatgccggacaggggccccaaaatgttcaa
aaaggcgggaatcaacccaagaagaagtttaagtgcaagaatgcagaacagaacaataag
agttcgaatttcatgccgtatgattattcctctgttgattttaggcagtttcaaggtggg
gccggcagtgccagtgggggtgtgcagatgaaaaggactttccaacccaagaatcgcgga
aaacacaacaaaaagggggctaaatcatcgacgtttgctaacttgggtagacacaacaga
gggcaacacaactga
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