KEGG   Trinickia caryophylli: U0034_05895
Entry
U0034_05895       CDS       T09722                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
tcar  Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:tcar00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tcar02044]
    U0034_05895 (tssC)
Secretion system [BR:tcar02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   U0034_05895 (tssC)
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: WQE12929
LinkDB
Position
1:complement(1295710..1297200)
AA seq 496 aa
MNQQTATASVAQPDTAAASSLLDEIVEKSKVAKSDSEHERAKDLISELAHQVLEGTVVVS
DNLSATLDARIAELDRLLSAQLSEVMHAPAFQRMESTWRGLDYLCKESNTGSTIKIRVLN
AAKREIVRDFKAAAEFDQSALFKKIYEEEFGTFGGAPFGALVGDFEITRQPEDMYFIEQM
SHVAAAAHAPFITSASPELLGLESYSDLGKPRDLGKVFDTVEYAKWKSFRESEDSRYVGL
TLPRYLGRLPFNPKDGLVADKFNFVEDVDGTDHNKYLWCNAAWAFATRLTAAFDDFGWCA
AIRGVEGGGLVEDLPTHTFKTDDGEIALKCPTEIAITDRREKELSDLGFIPLVHCKNSDY
AAFFAAQSVQRPKKYNTDSANANAVLSAQLQYIFSVSRIAHYLKAMMRDKIGSFASAQNV
ETFLNRWIAQYVLLDDNATQEQKAQFPLREASIQVSEIPGKPGSYRSVAFLRPHFQLDEL
SISLRLVADLPKPAGA
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgaatcagcaaacggccacggcgagcgtcgctcagcccgacactgcggcagcgagttcc
ctgctcgacgaaatcgtcgagaagagcaaggtcgcgaaatccgattccgagcacgagcgt
gcgaaggatctcatcagcgagctcgcgcatcaggtgctcgaggggacggtcgtcgtctcc
gacaatctttcggccacgctcgacgcgcgtatcgccgagctcgaccgcctcctttccgcg
cagctcagcgaagtgatgcacgctccggctttccagcgcatggaaagcacgtggcgcggc
ctcgactatctctgcaaggagagcaacaccggctcgaccatcaagatccgcgtgctcaac
gcggccaagcgcgagatcgtgcgcgacttcaaggccgcggccgaattcgaccagagcgcg
ctcttcaagaagatctacgaagaggagttcggcacgttcggcggtgcgccgttcggtgcg
ctcgtgggcgacttcgagatcacgcgtcagcccgaggacatgtacttcatcgagcagatg
tctcacgtggcggcggccgcgcatgcgccgttcatcacgtcggcctcgcctgaactgctc
gggctcgaatcgtattccgatctcggcaagccgcgcgacctcggcaaggtgttcgacacg
gtcgaatacgcgaagtggaagtcgttccgcgagtcggaagattcgcgctacgtcgggctc
acgctgccgcgctacctgggccgcctgccgttcaatccgaaagacggtctggtcgcggac
aaattcaacttcgtcgaagacgtcgacggcaccgatcacaacaagtacctgtggtgcaat
gcggcgtgggcgttcgccacgcggctgactgccgcgttcgacgatttcggctggtgcgcc
gcgattcgcggcgtggaaggcggcgggctcgtagaggatctgccgacccacaccttcaag
accgacgacggcgaaatcgcgctcaaatgcccgaccgagatcgccatcacggatcgccgc
gagaaagagctgagcgacctcggtttcataccgctcgtgcattgcaagaattccgactac
gcggcgttcttcgcggcgcaatcggtgcagcggcccaaaaaatacaacaccgacagcgcc
aatgcgaacgcggtgctgtcggcgcagctgcaatacatcttctcggtgtcgcgaatcgct
cattacctgaaggcgatgatgcgtgacaagatcggcagcttcgcgtcggcgcagaacgtc
gaaaccttcctgaaccgttggatcgcgcagtacgtgctgctcgacgacaacgccacgcaa
gagcaaaaggcgcagtttccgctgcgcgaggcgtcgatccaggtatccgagattccgggc
aagccgggttcgtatcgttcggtcgcattcctgcggccgcattttcagctcgacgagctg
tcgatttcactgcggctcgtcgctgatctgccgaaaccggcaggcgcataa

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