Trinickia caryophylli: U0034_06180
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Entry
U0034_06180 CDS
T09722
Symbol
rfbH
Name
(GenBank) lipopolysaccharide biosynthesis protein RfbH
KO
K12452
CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:
1.17.1.1
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar00520
Amino sugar and nucleotide sugar metabolism
tcar00541
O-Antigen nucleotide sugar biosynthesis
tcar01100
Metabolic pathways
tcar01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
U0034_06180 (rfbH)
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
U0034_06180 (rfbH)
Enzymes [BR:
tcar01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.1 CDP-4-dehydro-6-deoxyglucose reductase
U0034_06180 (rfbH)
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Motif
Pfam:
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
WQE12981
LinkDB
All DBs
Position
1:complement(1368547..1369860)
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AA seq
437 aa
AA seq
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MTQDSLRKQIGELAQQYSKEAFRRRDFEPGVTVIPPSGKVIDGAEVGLMIEAALDGWLTT
GRFNEAFEARLAKFLGVQNVLTTNSGSSANLLAFTALTSPTLGERAIVPGDEVIGVAAGF
PTTVNPIIQNGAIPVFVDVDIPTYNVDPALIEAAITPKTKAIMLAHTLGNPYNLKVVREL
CDKYNLWLVEDCCDALGSRYDGRLVGTFGDIGTLSFYPAHHITMGEGGAVFTNNPDLRRA
VESIRDWGRDCYCQPGKDNTCGKRFCWKLGDLPFGYDHKYTYSHLGYNLKISDMQAACAL
AQMDKLESFIEARKHNFDYLKSKLASCEEFLILPEPTPGSEPSWFGFPITIRESASFNRV
DLLEYLDQYKIGTRLLFAGNLTRQPYMKGRNYRVSGTLEQTDRIMNQTFWVGVYPGLTSE
MLDYVVDRLETFVGVNF
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgactcaagattccctgagaaagcaaatcggcgaactcgctcaacaatattcgaaagag
gcgtttcgccggcgcgacttcgaaccgggcgtgaccgtcatcccgccctccggcaaggtg
atcgacggcgctgaagtcgggctgatgatcgaagcggccctcgatggctggttgacgacg
ggacgcttcaacgaagcattcgaggcgcgccttgccaaattcctgggcgtgcagaacgtc
ttgacgacgaactccggttcgtcggccaacctgcttgccttcacggcgctgacctcgccg
acgctcggcgagcgcgcgatcgtgcccggcgacgaagtgatcggcgtggcggcgggcttc
ccgacgacggtcaatccgatcattcagaacggtgcgattcccgttttcgtcgacgtggac
attccgacctacaacgtcgatccggcgttgatcgaggcggcgatcacgccgaagacgaag
gcgatcatgctggcgcacacgctcggcaatccgtacaacctgaaggtcgtgcgcgaactg
tgcgacaagtacaacctgtggctcgtcgaagactgctgcgacgcgctcggctcgcgctac
gatgggcggctcgtcggcacgttcggcgatatcggcacgttgagcttctaccccgcgcat
cacatcacgatgggcgagggcggtgcggtgttcacgaacaatccggacctgcgccgcgcg
gtggaatcgatccgcgattggggccgcgactgctactgccagccgggcaaggacaacacc
tgcggcaagcgcttttgctggaagctgggcgatctgccgttcggctacgaccacaagtac
acgtactcgcacctcggctacaacctgaagatctccgacatgcaggccgcgtgcgcgctc
gcgcagatggacaagctcgagagcttcatcgaggcgcgcaagcacaacttcgactacctg
aagtcgaaactggcttcgtgcgaggagtttctcattctgccggagccgacgcccggcagc
gagccgtcctggttcggcttcccgatcacgattcgcgaatccgcgtcgttcaaccgcgtc
gatctgctcgagtacctcgaccagtataaaatcggcacgcgtttgcttttcgcgggcaat
ctgactcgccagccgtatatgaaggggcgcaactatcgcgtgtcgggcacgctcgagcag
acggaccgcatcatgaaccagacgttctgggtaggggtatacccggggctgacgtccgag
atgctcgattacgtcgtcgatcggctcgaaacgttcgtcggcgtcaatttttaa
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