Trinickia caryophylli: U0034_17455
Help
Entry
U0034_17455 CDS
T09722
Name
(GenBank) form I ribulose bisphosphate carboxylase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar00630
Glyoxylate and dicarboxylate metabolism
tcar01100
Metabolic pathways
tcar01110
Biosynthesis of secondary metabolites
tcar01120
Microbial metabolism in diverse environments
tcar01200
Carbon metabolism
Module
tcar_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
U0034_17455
Enzymes [BR:
tcar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
U0034_17455
BRITE hierarchy
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
WQE11515
LinkDB
All DBs
Position
1:3856117..3857601
Genome browser
AA seq
494 aa
AA seq
DB search
MNDFSKAAVEPARTPRERYTAGVLKYREMGYWQPDYTPKDTDVIALFRITPQAGVEPEEA
AAAVAGESSTATWTVVWTDRLTACDMYRAKAYRIDRVPSSPDSEPQYFAYIAYELDLFEE
GSVANLTASIIGNVFGFKPLKALRLEDMRIPVAYLKTFQGPPTGIIVERERLDKYGRPLL
GATVKPKLGLSGKNYGRVVYEGLKGGLDFLKDDENINSQPFMHWRDRFLFAMEAVNRAQA
ETGEVKGHYLNVTAGTIEDMYERAEFAKELGSCIVMIDLVIGWTAIQSMSKWARRNDMVL
HLHRAGHGTYTRQRNHGISFRVIAKWLRMAGVDHAHAGTAVGKLEGDPLAVQGYYNVCRE
SHNEVDLSRGLFFEQPWAGLRKVMPVASGGIHAGQMHQLLDLFGDDCVLQFGGGTIGHPA
GIQAGAIANRVALEAMVKARNEGRDIVNEGPDVLEAAARSCTPLKQALDVWKDVTFNYAS
TDTPDFAATPSVAA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatttcagcaaggccgccgtcgagccggcacgcaccccgcgcgaacgctatacc
gccggcgtgctgaagtaccgcgaaatgggctattggcaacccgactatacgccgaaggat
acggacgtcatcgcgctctttcgcatcacgccgcaagcaggcgtcgaacccgaggaggcc
gcggcggccgtggcaggcgaatcgtcgacggcgacgtggaccgtcgtgtggacggaccgc
ctcaccgcatgcgacatgtatcgtgcaaaagcctatcgcatcgatagagtgccttcatcg
cccgacagcgagccgcagtacttcgcctatatcgcttacgagctcgatctgttcgaggag
ggctcggttgcgaacctgacggcctcgatcatcggcaacgtgttcggcttcaagcccttg
aaggctttgcgtctcgaagacatgcgcattccggtggcctatctgaagacgtttcagggc
ccgcccaccgggatcatcgtcgagcgcgagcgtctggacaaatacggccggccgctgctt
ggcgccaccgtgaagccgaagctcgggctgtcgggcaagaactatggccgcgtcgtatac
gaaggcctcaagggagggctcgatttcctgaaggacgacgagaacatcaattcgcagccg
ttcatgcactggcgcgaccgctttctcttcgcgatggaagccgtcaaccgcgcgcaggcc
gaaacgggcgaagtgaagggccactacctgaacgtgacggccggcacgatcgaagacatg
tacgaacgcgccgaattcgcgaaagagctgggctcgtgcatcgtgatgatcgacctcgtg
atcggctggaccgcgatccaatcgatgtcgaaatgggcccgtcgcaacgacatggtcctg
catttgcatcgtgcaggccatggcacctatacgcggcagcgcaatcacggcatttcgttt
cgcgtgatcgccaagtggctgcgcatggcgggcgtcgatcacgctcacgcgggcacggcg
gtgggcaagctcgagggcgatccgctcgcagtgcaaggctattacaacgtgtgtcgggaa
tcgcacaacgaggtcgatctgtcacgcgggctctttttcgagcagccgtgggccgggctg
cgcaaggtgatgccggtcgcttcgggcggcattcacgcggggcagatgcaccagttgctc
gatctgttcggcgacgattgcgtgctgcagttcggcggcggcacgatcggccacccggcc
gggatacaggccggggcgatcgcgaaccgcgtggcgctcgaagcgatggtgaaggctcgc
aacgagggccgcgacatcgtgaacgagggaccagacgtgctcgaggccgccgcgcggtct
tgcacgccgctcaagcaggcgctcgatgtgtggaaggacgtcacgttcaactacgcatcg
accgatacgcccgacttcgcggcgacgccgagcgtcgcagcctga
DBGET
integrated database retrieval system
