Theobroma cacao (cacao): 18597148
Help
Entry
18597148 CDS
T02994
Name
(RefSeq) tRNA wybutosine-synthesizing protein 2/3/4
KO
K15450
tRNA wybutosine-synthesizing protein 3 [EC:
2.1.1.282
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcc03016
]
18597148
Enzymes [BR:
tcc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.282 tRNAPhe 7-[(3-amino-3-carboxypropyl)-4-demethylwyosine37-N4]-methyltransferase
18597148
Transfer RNA biogenesis [BR:
tcc03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
18597148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TYW3
Met_10
Kelch_1
Kelch_3
Kelch_4
Kelch_5
Kelch_2
Kelch_6
MTS
DNA_methylase
Cons_hypoth95
Methyltransf_15
TRM
Motif
Other DBs
NCBI-GeneID:
18597148
NCBI-ProteinID:
XP_007026072
LinkDB
All DBs
Position
6:complement(25287308..25292894)
Genome browser
AA seq
1041 aa
AA seq
DB search
MEFDKRKASTLASLSSNETDKSPKGTLDTPIIPLLDAINNHPSYFTTSSCSGRISILSQP
KPDPNSNNPTKKKARGGTWLFITHDMADPDSVISLLFADSTKLTQLSELVFRFEPLIIAV
ECRDLNSAQNLVSLAIACGFRESGITSVSKRVIVGIRCSIRMEVPLGDTQKIMVSKDYVR
FLVEVANEKMEANRQRSEGFLRAFMKDQAGAYENGNGSICSESGDWNEGQDGLERSFGDA
QDIDPNEKTTFSCQSLAGTEGIRSCSLSITKMVIVGEPVERLFLWGHSACTVDNIDKTMV
LVFGGFGGIGRHARRNDSFLLDPFLGNLKEINVVGCPSPRLGHTSSLVGDCMFVIGGRAD
PLNILSDVWVLNTVKNEWRLLDCTGSAFPPRHRHAAAVVGSKIYVFGGLNNDTISSSLHV
LDTNTLQWEELVVHGEWPCARHSHSMVTYESKLFMFGGYHGEKALGDLYSFDTQTCLWKI
EKVGGRSPHARFSHSMFVYKNYIGIIGGCPVRQHCQELALLDIRSLVWKHVTLNSIDKEL
FVRCTANVVHDNLVMVGGGAACYAFGTKFSEPVKIELLPLLSLDDHENAPKMGENQVNNQ
EEGMTANGNDLIQASHVGNALGSTQSPKPQSLNVGNQMVASSWVVQLERKYAKLGKDILK
KFGWLDLERKAYALDDGLRISFPVTEKFCAIFPEDKFEGLIDHHPSKTFRAESVLLNEVS
SSAALDILKKCGATKLPDEVIEARKASKSPLKIMTEAVASLIRHKGLSVKLLEQLPSRWE
RLGDIVVLPVSSFKDPVWDSIGEELWPIIARSLNTCRLARQGRVAPNGTRDSTLEILMGD
SGWVDHRENGILYSFDATKCMFSWGNLSEKMRMANLDCTDAVIVDLFAGIGYFVLPFLVR
AKAKLVYACEWNPHAIEALKRNLQANSVSDRCIILEGDNRITAPKGVADRVCLGLLPSSE
ASWLIAVRALRSEGGILHVHGNVKDTNEESWTKHVSKSISEIARSEGHCWEVAVEHVERV
KWYAPHIRHLVADVRCRQIHA
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgacaagaggaaagcgtcgacgctagcgtcactgagctcaaatgagacggac
aaatcaccgaaaggcacgttagacacgcccatcatccctctcctcgacgccatcaacaac
cacccttcttacttcactaccagctcctgctccggtcgtatctctatcctttcccaaccc
aaacccgaccccaactcgaataatccaaccaaaaagaaagcccgaggagggacctggctc
ttcatcacccacgacatggcggatcccgactcagtcatctccctcctctttgctgactcg
accaagttgactcaactaagtgagttggtcttccgttttgagcctctcatcattgcggtt
gagtgcagggacttaaattcagctcagaacttggtttccttggctattgcttgcgggttc
agagagtctgggattacaagcgtgagtaagagagtaatcgtggggatacggtgctcgatt
cggatggaggtgcctttgggtgatacccagaaaattatggtatctaaagattacgtgagg
ttccttgttgaggttgctaatgagaaaatggaagctaataggcagagaagtgaaggtttt
cttagagcttttatgaaggatcaggctggagcatatgagaatgggaatggctcaatctgt
agtgagagtggtgattggaatgaaggtcaggatggtttggagagaagttttggagatgcc
caagacatcgatcctaatgagaaaacgactttttcttgtcaatcattggcaggaacagaa
ggaattcgcagttgtagtttatctattactaagatggtaattgttggtgaacccgtagaa
aggctgttcctttgggggcattcagcttgtaccgtggataacatagacaaaactatggtt
cttgtctttggtggctttgggggcattggaagacatgcaaggagaaatgattcttttctt
cttgatccatttcttggaaatttgaaagaaattaatgtggtgggctgtccatctcctcgc
ctgggtcacacctcttctttggtaggagattgcatgtttgttattggaggcagggctgat
cctttgaacattctgagtgatgtatgggttctcaatacggttaagaatgaatggaggtta
ctagattgtactggcagtgcctttcctcccaggcatcgacatgcagctgcagtagttgga
tcaaagatttatgtctttggtggacttaacaatgatacaatctcgtcatctttgcatgtt
cttgacaccaatacactgcagtgggaagaattggtggtccatggtgaatggccatgtgcc
cgtcattctcactcaatggttacttatgagtctaagttattcatgtttggagggtaccat
ggagagaaagcacttggggacttgtacagctttgatactcaaacatgtttatggaaaata
gaaaaggtaggaggaagaagcccacatgctaggttctcccactcgatgtttgtctacaaa
aattatattggaataatcggaggttgtcctgtcagacaacattgtcaagagttggcatta
cttgatatacgaagcctagtttggaagcatgtgaccctcaattcaattgataaagaactg
tttgtgcgatgcaccgccaatgttgttcatgataatcttgttatggttggtggtggagca
gcttgttatgcctttggaacaaagtttagtgagccagtgaaaattgaattgcttcctttg
ttatctttagatgatcatgaaaatgctccaaagatgggagaaaatcaagttaataaccaa
gaggagggtatgacagcaaatgggaatgatcttattcaagcttcacatgttggaaatgct
cttggttcaactcaaagtcctaaaccacagagtttaaatgttgggaatcagatggttgct
tcaagttgggttgtacaacttgaaagaaaatatgcaaaattaggaaaggacatattgaag
aagtttggatggttagatcttgagagaaaggcttatgcactagatgatggtctacgtatc
tctttccctgtgacagagaagttttgtgctatatttccagaagacaaatttgaaggcttg
attgatcatcatccatctaaaacatttagagctgaaagtgttctgttaaatgaggtgtcc
tcctcagcagctttggatattcttaagaaatgtggtgctactaagctgccagatgaggtt
attgaagccagaaaagcttccaaatcacccttaaaaataatgactgaagctgttgcctct
ttgattaggcataagggcttgtccgttaaacttctggagcagctaccaagcaggtgggaa
cgacttggtgatattgttgtgcttccagtttcatccttcaaggacccagtatgggattcg
attggagaggagctttggcccattattgccagatccctgaatacttgtcgccttgctcgc
caaggccgagttgcaccaaatggtacaagagacagtactttggagattcttatgggagat
agtggctgggttgatcatcgtgaaaatgggattctatattcttttgatgcgactaagtgc
atgttttcttggggcaatctttctgagaaaatgcgcatggccaatttggattgtacagat
gcagttatcgtggatctgtttgctggaattggatattttgtgttgcccttccttgttagg
gcaaaagcaaagctagtatatgcttgtgaatggaatccccatgccattgaggctcttaaa
cggaatcttcaagccaattctgtctctgatcgttgtatcatacttgaaggggataatcga
attaccgcacccaagggagttgcagatcgagtttgtcttggtcttcttccgtcaagtgag
gctagctggcttattgctgtgagggcattaaggagtgagggtggaatattacacgtgcat
gggaatgtgaaggacacaaatgaggaatcgtggactaaacatgtttcaaaatcgatatcc
gaaatcgctagatccgaaggtcattgttgggaagtggctgtagagcatgtggagagagta
aaatggtacgccccacacatccgccatcttgttgctgatgttagatgcagacagattcat
gcctga
DBGET
integrated database retrieval system
