Theobroma cacao (cacao): 18597851
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Entry
18597851 CDS
T02994
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z32
KO
K12896
serine/arginine-rich splicing factor 7
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18597851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcc03041
]
18597851
Spliceosome [BR:
tcc03041
]
Common components
Common spliceosomal components
SR proteins
18597851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
RRM_1
zf-CCHC_5
zf-CCHC_3
zf-CCHC_2
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
18597851
NCBI-ProteinID:
XP_017976200
LinkDB
All DBs
Position
5:2312770..2315236
Genome browser
AA seq
303 aa
AA seq
DB search
MPRFDGRYGTTRLYVGRLSSRTRARDLEHFFSRYGRIRDVDMKHDFAFVELSYPRDADGA
RYSLDGRDFDGSCIIVEFARGGPRGSREYLGRGPPPGSGRCFNCGIDGHWARDCRANKCY
RCGERGHIERNCKNRAKKLNRPGRSYSRSPVRSRSPHHGRSESRSFSRGRSYSXSRSPAR
RERSIERDDRVESPEPKNIAPLSKGRKRSPTPDEDSSRQERGSPFPQNGKLAAQQNEANY
SGSLRGVSTNPATXDRDERPARRRYKTXFDTSGHSQSPSPRDNRSPVDNDYDDPLSSRGS
EFP
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcttcgatggtcgttatggtaccactcgtctgtatgttggccgtctctcctca
cggacgcgagcacgtgatctggaacacttcttcagccgatacgggagaatacgtgatgtg
gatatgaagcatgacttcgcctttgttgaacttagctatccccgagatgctgatggtgca
aggtatagcttggatggtagggactttgatggaagttgtatcattgttgagtttgcaagg
gggggtccacgaggttcccgagaatatctaggaagaggccctccacctggatctggtcgc
tgctttaattgtggtattgatggccattgggcccgagattgtagggctaacaaatgttat
cgttgtggagaaagaggtcacatagagcgcaactgcaagaacagggccaaaaagctaaac
agacctgggcgtagttattctcgatcaccagttagatcacgctctcctcatcatggcaga
agcgagagtcgaagtttcagccgtgggcggagctacagttgatcaagatctccagcaagg
agagagcgaagtattgagcgtgatgatagagtagagagtcctgagcccaagaacatcgca
cctctctccaaggggaggaaacgcagtcccacacctgatgaagatagcagtcggcaggag
agaggtagcccttttccacaaaatgggaaactggctgctcagcaaaatgaggccaattac
agtggtagtctccgaggagtgagcacgaaccctgctaccnctgatagagatgagaggcct
gccagaagacggtacaaaaccnattttgacaccagtggtcacagccaaagtcccagtcca
agggacaacaggagtcctgttgataatgattatgatgaccctctctcatctagaggcagc
gagttcccttaa
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