Theobroma cacao (cacao): 18601244
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Entry
18601244 CDS
T02994
Name
(RefSeq) SUPPRESSOR OF ABI3-5
KO
K13094
RNA-binding protein 5/10
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcc03041
]
18601244
Spliceosome [BR:
tcc03041
]
Complex A
Other components
Complex A specific factors
18601244
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
OCRE
G-patch
G-patch_2
zf-RanBP
Motif
Other DBs
NCBI-GeneID:
18601244
NCBI-ProteinID:
XP_017975065
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Position
4:complement(4803620..4818639)
Genome browser
AA seq
1116 aa
AA seq
DB search
MERGFRGRGQGQAQSRGNSASLVHKWHNRLCFFCIILQEIKQFFAPTRENIDMDPARYPL
QQGWDNNSALEGYSGVHEPNFRVGGSYDERRFLDERYSRDNVYPRSAYHREFLERDNHST
PSAAAAIWSQSRRRSYEEEYPHDRDSRHHQKPYVDSYSDMDTFRDHEITSFQDFDKFRDG
YRGVDNFRDHEFDRPSRCGGRERDDYSYDDYDYRPRVSHQSREDSRERDYEYGRHSYDSD
YESGSRRDGNWRRRESRDRDRLSRERDQSPHKRHERSRSRSHGRDGRPRSRSPRSRNHGR
SHREDSYDDGRNEKTEKRRDREEKYQRGHYSVAPSATIVVKGLSQKTTEEDLYQILAEWG
PLRHVRVIKERHSGISRGFAFIDFPSVGAARTMMDRIGDDGLVVDGRKLFFEYSSKPTGG
TGGPFGQDNAVKSGHSNHKSITVPSDWMCTICGCVNFARRTSCFQCNEPRADDAPLADIS
LSNSTSLGKKGSESGPTHVLVIRGLDENADEEMLRYEFSKHAPIKDLRLVRDKFTHVSRG
FAFVHFHSVDDATKALEATNGTTLEKNGQILRVAYAKSILGPGSGTLGPSQSSSLAAAAI
EAAAFSQQYDAVGWTPKEYNPDDKQSTGWQEQVAGSVAVQRDGSALHSGFVWDEASGYYF
DAASGFYYDGNTGLYYDGNSGIWYSYDQQSQQYIPCSDQNHNRTPGTQSEPSKGADGSIN
RKAVISAPAATVMSVEKAASLPDAVQAAATAALAAEKKEKEKEKSKEIKLASKSSILANK
KKMNNVLTMWKQRSYEGQATRLALDDSHLSASAEDRPLSAGQQAKSKVKFDVMGLKESNT
SSLGVNTAAQAAFTGGLDSPVKPRPVSNSSGGTLMGVIRGSARGLVKSDTPYSGSSAGVS
TSSAAAASGEGSFSSTNSDIPTVMTPFRTDASALGSYTPTVTGSGKRRFSETPVPSSINK
EQSHSAYRDRAAERRNLYGSSSTGDDLPDHDFWNSNRDLASKKFSSDPMPFPPGVGGGRG
VISDDVQSFEVITAEKAIDENNVGNRMLRNMGWHEGLGLGKDGSGMTEPVQAQAMDSRAG
LGSQLKKLDPSLEVQAGDSYKTVIHKKALARFREMS
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggggatttcgaggccgaggccaaggccaagcccaaagtcgtgggaattctgct
tccttggttcataaatggcataaccgtctctgtttcttctgcattatattacaggaaatt
aaacaattcttcgccccaaccagggagaatatcgatatggatcctgctcgctaccctctc
cagcaaggatgggataataacagcgctcttgaggggtattccggtgtccatgagcccaat
ttccgggttggtggttcatatgatgagaggagatttctagatgaaagatactcaagggat
aatgtctatccaagaagtgcttaccatcgagagtttttggagagggataatcactccact
ccatctgcagctgccgctatctggtctcaatcaaggaggagaagttatgaggaagaatat
ccccatgatagggattctagacatcatcagaagccttatgttgattcatatagtgacatg
gatacatttcgtgatcatgagatcacttcatttcaagattttgataagtttcgggatggc
tatcgtggtgttgacaactttcgtgaccatgaatttgacaggccctctaggtgtggggga
cgagaacgggatgactactcatatgatgattatgactataggccccgtgtttcccatcag
agcagggaggacagccgtgagagggattatgaatatggtcgacatagttatgattctgat
tatgaaagtggcagtcggagagatggcaattggaggaggcgtgaatctcgtgatcgagat
cgcttgagtagagagagagatcaaagtccacataaaaggcatgaaaggtctcgctcgcga
tcccacggacgtgatggtcgtcccagatcacggtcacctcgaagtcgaaaccatgggcga
agccatagagaggacagctatgatgatggtcgaaatgagaaaactgagaagcgaagggac
cgtgaagagaaatatcagcgggggcattattctgtggcaccatctgcaactattgttgta
aagggtctctcacagaaaacaacagaagaagatctataccagattcttgctgaatggggg
ccacttcgtcatgtccgtgtaattaaggagcgacattctggcatttctcgtggatttgcg
tttatcgattttccttctgtgggggcagcacgcacaatgatggacaggattggtgacgat
ggtcttgttgtggatggtaggaagcttttctttgagtacagtagtaagccaactgggggc
actggtggaccttttggtcaagataatgctgtgaaatcgggtcattcaaatcataaaagc
atcacagtaccttctgattggatgtgcacgatttgtggatgtgtcaattttgcacgacga
acttcatgctttcagtgtaatgagccacgtgctgatgatgctccactagctgacatatct
ttatcaaattcaacatcgctaggaaagaaaggatctgaatcaggtcctactcatgtattg
gttattcgtgggttggatgaaaatgctgatgaggaaatgcttcgatatgagttttctaaa
catgctccaattaaggatcttcgccttgttagagacaagttcacccatgtttctagggga
tttgcttttgtacatttccattcggtagatgatgccaccaaagctcttgaagctacaaat
ggaacaacccttgagaagaatggacaaatcttaagggtagcatatgcaaagagtattctt
gggccaggatcagggactttgggaccttcacagtcgagcagtcttgcagctgctgctatt
gaggcagcagcattttctcaacagtatgatgctgttggatggacaccaaaggaatataat
ccggatgacaaacagtctactggctggcaggagcaagttgctggttcagttgcagttcaa
cgagatggttcagctttgcattctggatttgtgtgggatgaagcctctggttattacttc
gatgctgcttctgggttttattacgatggaaatacaggtctgtattatgatggtaacagt
gggatttggtattcgtatgatcaacaatctcagcagtacatcccttgcagtgatcagaat
cacaacagaacacctggtacacaatctgagccttccaagggtgctgatggttccattaac
aggaaagcagtaatatctgcaccggctgctactgtcatgtcagttgagaaggcagcctca
ttacctgatgcggtccaagctgctgcaacagcagcactagctgcagagaagaaagagaag
gagaaggagaaatcaaaagagataaaacttgcttcaaaaagtagtatactggctaataag
aagaaaatgaataacgtgctgacaatgtggaaacagaggagttacgaaggtcaggcaacc
cgtttggctcttgatgacagtcacttgtctgcttcagctgaggatagacctctgtcagct
ggacaacaagcaaagagcaaggttaaatttgatgtgatgggcctgaaggagagtaataca
tcaagtttaggagtcaacacagctgcccaagctgcatttactgggggtttggactctcct
gtcaagccaaggcctgtaagtaacagctcagggggaactttaatgggtgtaataagaggc
tctgctaggggcctggtgaagtctgatactccatactctggatcatctgctggagtttcc
acctcttcagctgctgctgcaagtggtgaaggttctttctcatcaacaaattcagatata
cctaccgtcatgactccctttaggacggatgcatctgcattgggttcttatactcctact
gtaactgggagtggtaaaagaaggttttctgaaacaccagtgccttcttcaatcaacaag
gagcagtctcatagcgcttatagggatcgtgcggctgagaggagaaacttgtatggttca
tcttccaccggggatgatctgcctgaccatgatttctggaattcaaatcgagatttggca
tccaaaaaattctcctcagatccaatgcctttcccacctggtgttggtggtggacgtggg
gtaatatcagatgatgttcagagttttgaggtgatcacggcagagaaagcaattgatgaa
aacaatgtgggcaaccgaatgctccgcaatatgggttggcatgaaggattgggattgggg
aaggatggaagtggaatgacagaaccagttcaagcacaggccatggatagtagagcagga
cttggaagtcagctgaagaagttggacccaagccttgaggtgcaagccggcgatagttat
aaaaccgtcattcataagaaagcacttgctaggttccgtgagatgtcatag
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