Theobroma cacao (cacao): 18612139
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Entry
18612139 CDS
T02994
Name
(RefSeq) zinc finger BED domain-containing protein RICESLEEPER 2
Organism
tcc
Theobroma cacao (cacao)
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Gene cluster
GFIT
Motif
Pfam:
hAT-like_RNase-H
Dimer_Tnp_hAT
zf-BED
ATP-synt_E_2
Motif
Other DBs
NCBI-GeneID:
18612139
NCBI-ProteinID:
XP_007048823
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Position
1:9596483..9600536
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AA seq
657 aa
AA seq
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MDMSDAVVANSSRLKSIVWNDFDRVKKGDTFVAICRHCKKKLSGSSTSGTSHLRNHLIRC
QRRSNHGIAQYFSGREKKKEGSLAVVTIDQEQKKDEVLSLVNLRYEQEQIKNEPVTIGNS
SLDQRRSQFDLARMIILHNYPLDMVDHVGFKIFVRNLQPLFELVTYNKVEADCMEIYAKE
KQRVYEVLDKFPGKISVTADVWTASDDSAYLSLTAHYIDEDWQLKKRILNFVTIDPSHTE
DMHSEVIMTCLMDWDIDRKLFSMIFDSYTSENIVDRIRDRLSQNRFLYCNGQLFDVRCAV
DLLNRMVQDALDALCEVTQKIRESIRYVKSSEATQSMFIELAHEVQVESQKCLRIDNPLK
WNSTFLMLEVALEYRKVFCCLQDRDPVNMKFLPSDLEWDRVSVIASFLKLFVEVTNVFTR
SKYPTANIFFPEICDIHLQLIEWCKNPDDYINSLAVKMRKKFEDYWDKCSLGLAVAAMLD
PRFKMKLLEYYYPQLYGDSASELIDDVFECIKSLYNEHSMVSPLASSLDQGLSWQVSGIP
GSGKDSRDRLMGFDKFLHETSQSDGSNSDLDKYLEDPLFPRNVDFNILNWWKVHTPSYPI
LSMMAHNILGIPISKVAAESTFDTGGRVVDHNWSSLPPTTVQALMCSQDWIRSELES
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggatatgtctgatgcagtcgtagcaaattcgagcagattgaaatctattgtatggaat
gactttgatagggttaaaaagggtgatacatttgtggctatttgtaggcattgtaaaaag
aagcttagtggatcaagtactagtggaacctcacatctgaggaaccatttaattaggtgt
cagagaagatctaatcatggcatagctcaatacttttctggtagagaaaagaaaaaggaa
ggatctctggctgttgtaactattgatcaagagcagaagaaggatgaagtacttagcctt
gtgaatcttagatatgaacaggagcagattaaaaatgagcctgttacaattggcaatagt
agcttggatcaaaggcggagccaatttgatcttgcccgcatgatcatattgcataactac
cccttggatatggtggaccatgttggattcaagatatttgtcaggaatctgcagccattg
tttgaacttgttacatataataaagttgaagctgattgcatggaaatctatgcaaaggag
aagcaaagggtgtatgaggttttggataagttccctggaaaaatcagtgtaactgctgat
gtgtggactgcttcagatgattctgcatacttgagtttgacagcacactacattgatgag
gattggcaattaaaaaagaggattctgaattttgttactattgatccttctcatacagag
gacatgcattcagaggttataatgacttgtttgatggattgggatatagatcgtaagttg
ttttctatgatattcgatagttataccagtgaaaacattgtcgatagaatcagagatcgg
ctgtcacaaaataggttcctttattgtaatggtcaattatttgatgtacgctgtgcagta
gatctactcaatcgcatggttcaggatgccttggatgctctttgtgaagttacccagaaa
attcgggaaagcatccgctatgttaaaagttcagaagctacacagtctatgttcattgag
ctggctcatgaggtgcaggttgaaagtcaaaaatgcttacgtattgataatccattgaaa
tggaactcgacttttttgatgcttgaagttgctttagaatacaggaaagttttctgttgt
ctgcaggatcgtgaccctgtcaacatgaagtttctcccatctgatttggagtgggataga
gtgagtgtcattgctagcttcttgaagctgtttgtagaagttactaatgtttttacaaga
agtaagtatccaactgcaaatatatttttccccgagatctgtgatattcacttgcagttg
attgaatggtgcaagaatcctgatgattacatcaattccctggctgttaagatgaggaag
aagtttgaagactactgggacaagtgcagtctgggtttagcagttgcggctatgttagat
cctcgattcaaaatgaaactattggagtattactacccacaattatatggcgatagtgct
tcggagcttattgatgatgtttttgagtgtattaaatcactttacaatgaacattctatg
gtctctccattagcttcttcccttgatcagggactgagttggcaagtgagtggtattcct
ggctctggaaaagattctagggataggctgatggggtttgacaagttccttcatgaaact
tctcagagtgatggctctaattcggatttagacaagtacctggaggatcctctttttcct
cgtaatgttgatttcaacatactaaattggtggaaggttcacactccaagctatcctatc
ctatctatgatggcgcacaatattctaggaattcctatatcaaaagttgcagcagaatca
acatttgacactggaggaagagtggtcgatcataattggagctcattgcctccaactact
gttcaagccttgatgtgttcacaagattggataaggagtgaactcgagagttag
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